WormBase Tree Display for Gene: WBGene00016128
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| WBGene00016128 | SMap | S_parent | Sequence | C26B2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | elpc-4 | Person_evidence | WBPerson4055 | |||||
| Sequence_name | C26B2.6 | ||||||||
| Molecular_name | C26B2.6 | ||||||||
| C26B2.6.1 | |||||||||
| CE04092 | |||||||||
| Other_name | CELE_C26B2.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | elpc-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Oct 2007 16:51:06 | WBPerson2970 | Name_change | CGC_name | elpc-2 corrected to eplc-4 | ||||
| 3 | 20 Dec 2007 11:40:47 | WBPerson2970 | Name_change | CGC_name | elpc-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | elpc | ||||||||
| Allele (20) | |||||||||
| Strain | WBStrain00049459 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP4268 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable phosphorylase kinase regulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II and tRNA wobble uridine modification. Predicted to be located in cytoplasm. Predicted to be part of elongator holoenzyme complex and transcription elongation factor complex. Human ortholog(s) of this gene implicated in aniridia. Is an ortholog of human ELP4 (elongator acetyltransferase complex subunit 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:12271 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1171) | ||||
| Molecular_info | Corresponding_CDS | C26B2.6 | |||||||
| Corresponding_transcript | C26B2.6.1 | ||||||||
| Other_sequence | CRC00267_1 | ||||||||
| CR03251 | |||||||||
| CJC05793_1 | |||||||||
| Associated_feature | WBsf228616 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029213 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041240 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085038 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085039 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011199 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085037 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008089 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021128 | ||||||||
| Expr1036892 | |||||||||
| Expr1145279 | |||||||||
| Expr2011291 | |||||||||
| Expr2029527 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction | WBInteraction000029591 | ||||||||
| WBInteraction000031472 | |||||||||
| WBInteraction000198777 | |||||||||
| WBInteraction000200701 | |||||||||
| WBInteraction000207561 | |||||||||
| WBInteraction000215497 | |||||||||
| WBInteraction000216364 | |||||||||
| WBInteraction000231798 | |||||||||
| WBInteraction000254689 | |||||||||
| WBInteraction000259227 | |||||||||
| WBInteraction000271523 | |||||||||
| WBInteraction000290569 | |||||||||
| WBInteraction000301285 | |||||||||
| WBInteraction000312739 | |||||||||
| WBInteraction000318712 | |||||||||
| WBInteraction000324135 | |||||||||
| WBInteraction000338677 | |||||||||
| WBInteraction000341627 | |||||||||
| WBInteraction000350391 | |||||||||
| WBInteraction000355256 | |||||||||
| WBInteraction000363626 | |||||||||
| WBInteraction000372479 | |||||||||
| WBInteraction000389738 | |||||||||
| WBInteraction000392654 | |||||||||
| WBInteraction000410190 | |||||||||
| WBInteraction000412487 | |||||||||
| WBInteraction000418212 | |||||||||
| WBInteraction000424647 | |||||||||
| WBInteraction000435826 | |||||||||
| WBInteraction000500388 | |||||||||
| WBInteraction000514584 | |||||||||
| WBInteraction000514587 | |||||||||
| WBInteraction000547374 | |||||||||
| WBInteraction000576290 | |||||||||
| Map_info | Map | IV | Position | 3.57936 | Error | 0.000926 | |||
| Positive | Positive_clone | C26B2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036232 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
