WormBase Tree Display for Gene: WBGene00013550
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| WBGene00013550 | SMap | S_parent | Sequence | Y75B8A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gex-4 | Person_evidence | WBPerson6609 | |||||
| WBPerson1816 | |||||||||
| Sequence_name | Y75B8A.14 | ||||||||
| Molecular_name | Y75B8A.14 | ||||||||
| Y75B8A.14.1 | |||||||||
| CE23026 | |||||||||
| Other_name | CELE_Y75B8A.14 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | gex-4 | ||||||||
| DB_info | Database | AceView | gene | 3N306 | |||||
| WormQTL | gene | WBGene00013550 | |||||||
| WormFlux | gene | WBGene00013550 | |||||||
| NDB | locus_tag | CELE_Y75B8A.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013550|UniProtKB=Q9XW68 | |||||||
| family | PTHR21231 | ||||||||
| NCBI | gene | 176649 | |||||||
| RefSeq | protein | NM_067186.4 | |||||||
| TREEFAM | TREEFAM_ID | TF105810 | |||||||
| TrEMBL | UniProtAcc | Q9XW68 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XW68 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 May 2023 12:43:53 | WBPerson51134 | Name_change | CGC_name | gex-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gex | ||||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (6) | |||||||||
| Contained_in_operon | CEOP3888 | ||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00001661 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00015029 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable GTPase activity. Is an ortholog of human GPN3 (GPN-loop GTPase 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y75B8A.14 | |||||||
| Corresponding_transcript | Y75B8A.14.1 | ||||||||
| Other_sequence (55) | |||||||||
| Associated_feature | WBsf651529 | ||||||||
| WBsf227642 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037841 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002670 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058441 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018137 | ||||||||
| Expr1036052 | |||||||||
| Expr1161860 | |||||||||
| Expr2008409 | |||||||||
| Expr2026650 | |||||||||
| Drives_construct | WBCnstr00029599 | ||||||||
| Construct_product | WBCnstr00029599 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction | WBInteraction000009419 | ||||||||
| WBInteraction000138241 | |||||||||
| WBInteraction000161792 | |||||||||
| WBInteraction000205143 | |||||||||
| WBInteraction000266531 | |||||||||
| WBInteraction000272866 | |||||||||
| WBInteraction000295210 | |||||||||
| WBInteraction000310471 | |||||||||
| WBInteraction000341142 | |||||||||
| WBInteraction000341459 | |||||||||
| WBInteraction000350750 | |||||||||
| WBInteraction000352901 | |||||||||
| WBInteraction000355535 | |||||||||
| WBInteraction000384162 | |||||||||
| WBInteraction000408164 | |||||||||
| WBInteraction000408165 | |||||||||
| WBInteraction000416279 | |||||||||
| WBInteraction000421603 | |||||||||
| WBInteraction000428444 | |||||||||
| WBInteraction000462855 | |||||||||
| WBInteraction000462891 | |||||||||
| WBInteraction000464269 | |||||||||
| WBInteraction000464578 | |||||||||
| WBInteraction000467146 | |||||||||
| WBInteraction000468050 | |||||||||
| WBInteraction000468157 | |||||||||
| WBInteraction000468804 | |||||||||
| WBInteraction000470776 | |||||||||
| WBInteraction000471897 | |||||||||
| WBInteraction000472914 | |||||||||
| WBInteraction000473663 | |||||||||
| WBInteraction000474518 | |||||||||
| WBInteraction000474793 | |||||||||
| WBInteraction000475410 | |||||||||
| WBInteraction000580865 | |||||||||
| Map_info | Map | III | Position | 16.1275 | |||||
| Positive | Positive_clone | Y75B8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
