WormBase Tree Display for Gene: WBGene00013168

WBGene00013168 SMap: S_parent: Sequence: Y53F4B
  Identity: Version: 2
    Name: CGC_name: arp-1 Person_evidence: WBPerson1562
      Sequence_name: Y53F4B.22
      Molecular_name: Y53F4B.22a
        Y53F4B.22a.1
        CE35675
        Y53F4B.22b
        CE48840
        Y53F4B.22b.1
      Other_name: CELE_Y53F4B.22 Accession_evidence: NDB BX284602
      Public_name: arp-1
    DB_info: Database: AceView gene 2P407
        WormQTL gene WBGene00013168
        SignaLink protein WBGene00013168
        WormFlux gene WBGene00013168
        NDB locus_tag CELE_Y53F4B.22
        Panther gene CAEEL|WormBase=WBGene00013168|UniProtKB=Q9NA98
          family PTHR11937
        NCBI gene 175162
        RefSeq protein NM_064707.7
            NM_001306622.3
        TrEMBL UniProtAcc Q9NA98
            U4PR70
        UniProt_GCRP UniProtAcc Q9NA98
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 14 Nov 2008 16:27:48 WBPerson2970 Event: Acquires_merge: WBGene00000194
      Acquires_merge: WBGene00000194
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: arp
    Allele (56)
    Legacy_information: [C.elegansII] NMK. Sequence predicts protein with 50% homology to actin, 67% to vertebrate actin related protein. Antibody staining suggests located at cell division remnant. [RW]
    Strain: WBStrain00040378
    RNASeq_FPKM (74)
    GO_annotation: 00095869
    Ortholog (36)
    Paralog (11)
    Structured_description: Automated_description: Part of dynactin complex. Human ortholog(s) of this gene implicated in Down syndrome and colon cancer. Is an ortholog of human ACTR1A (actin related protein 1A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:219 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:167)
      DOID:14250 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:167)
  Molecular_info: Corresponding_CDS (2)
    Corresponding_CDS_history: Y53F4B.22:wp109
    Corresponding_transcript: Y53F4B.22a.1
      Y53F4B.22b.1
    Other_sequence (63)
    Associated_feature: WBsf644884
      WBsf990898
      WBsf990899
      WBsf990900
      WBsf1013947
      WBsf222537
  Experimental_info: RNAi_result (17)
    Expr_pattern: Expr8526
      Expr1023806
      Expr1035850
      Expr1160714
      Expr2009406
      Expr2027642
    Construct_product: WBCnstr00001390
    Microarray_results (19)
    Expression_cluster (92)
    Interaction: WBInteraction000009558
      WBInteraction000028355
      WBInteraction000028660
      WBInteraction000032598
      WBInteraction000033144
      WBInteraction000040615
      WBInteraction000041296
      WBInteraction000050386
      WBInteraction000050389
      WBInteraction000050536
      WBInteraction000113757
      WBInteraction000136436
      WBInteraction000157828
      WBInteraction000157841
      WBInteraction000157854
      WBInteraction000157869
      WBInteraction000157893
      WBInteraction000169178
      WBInteraction000174333
      WBInteraction000384569
      WBInteraction000503436
      WBInteraction000512684
      WBInteraction000512686
      WBInteraction000512687
      WBInteraction000512688
      WBInteraction000512689
      WBInteraction000512692
      WBInteraction000512697
      WBInteraction000512831
      WBInteraction000512834
      WBInteraction000512835
      WBInteraction000512847
      WBInteraction000512882
      WBInteraction000515140
      WBInteraction000515141
      WBInteraction000515146
      WBInteraction000515147
      WBInteraction000515155
      WBInteraction000515195
      WBInteraction000519822
      WBInteraction000522341
      WBInteraction000522349
      WBInteraction000522350
      WBInteraction000522355
      WBInteraction000522356
      WBInteraction000541942
      WBInteraction000546586
      WBInteraction000551464
      WBInteraction000552723
      WBInteraction000554244
      WBInteraction000558532
      WBInteraction000559631
      WBInteraction000561197
      WBInteraction000566237
      WBInteraction000566516
      WBInteraction000568678
      WBInteraction000568705
      WBInteraction000569049
      WBInteraction000572270
      WBInteraction000574256
      WBInteraction000577273
      WBInteraction000577978
      WBInteraction000579686
      WBInteraction000580847
      WBInteraction000582864
      WBInteraction000585130
      WBInteraction000585799
  Map_info: Map: II Position: 24.073 Error: 0.044205
    Positive: Positive_clone: Y53F4B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene