WormBase Tree Display for Gene: WBGene00011835

WBGene00011835 SMap: S_parent: Sequence: T19B10
  Identity: Version: 2
    Name: CGC_name: pgap-1
      Sequence_name: T19B10.8
      Molecular_name: T19B10.8
        T19B10.8.1
        CE45494
      Other_name: CELE_T19B10.8 Accession_evidence: NDB BX284605
      Public_name: pgap-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 11 Dec 2018 16:50:34 WBPerson1983 Name_change: CGC_name: pgap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pgap
    Allele (43)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP5280
    Ortholog (37)
    Structured_description: Automated_description: Predicted to enable phosphatidylinositol deacylase activity. Predicted to be involved in GPI anchor metabolic process and endoplasmic reticulum to Golgi vesicle-mediated transport. Predicted to be located in endoplasmic reticulum. Is an ortholog of human PGAP1 (post-GPI attachment to proteins inositol deacylase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T19B10.8
    Corresponding_CDS_history: T19B10.8:wp220
    Corresponding_transcript: T19B10.8.1
    Other_sequence: CBC06477_1
      Oden_isotig25919
    Associated_feature: WBsf647242
      WBsf977289
      WBsf977290
      WBsf977291
      WBsf232484
  Experimental_info: RNAi_result: WBRNAi00007670 Inferred_automatically: RNAi_primary
      WBRNAi00053497 Inferred_automatically: RNAi_primary
      WBRNAi00111240 Inferred_automatically: RNAi_primary
      WBRNAi00000823 Inferred_automatically: RNAi_primary
      WBRNAi00035650 Inferred_automatically: RNAi_primary
      WBRNAi00018821 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017180
      Expr1035217
      Expr1157063
      Expr2006242
      Expr2024460
    Drives_construct: WBCnstr00030347
    Construct_product: WBCnstr00030347
    Microarray_results (20)
    Expression_cluster (144)
    Interaction: WBInteraction000047304
      WBInteraction000137255
      WBInteraction000138714
      WBInteraction000147654
      WBInteraction000148175
      WBInteraction000148757
      WBInteraction000168388
      WBInteraction000184752
      WBInteraction000187471
      WBInteraction000188358
      WBInteraction000189372
      WBInteraction000191231
      WBInteraction000192567
      WBInteraction000192667
      WBInteraction000197562
      WBInteraction000198261
      WBInteraction000198979
      WBInteraction000199230
      WBInteraction000203859
      WBInteraction000204606
      WBInteraction000207389
      WBInteraction000208999
      WBInteraction000213599
      WBInteraction000216915
      WBInteraction000224750
      WBInteraction000228673
      WBInteraction000229475
      WBInteraction000230108
      WBInteraction000231118
      WBInteraction000231304
      WBInteraction000232638
      WBInteraction000233512
      WBInteraction000237197
      WBInteraction000237784
      WBInteraction000238393
      WBInteraction000247416
      WBInteraction000248269
      WBInteraction000250670
      WBInteraction000253070
      WBInteraction000255045
      WBInteraction000263159
      WBInteraction000263281
      WBInteraction000263306
      WBInteraction000263322
      WBInteraction000264189
      WBInteraction000265482
      WBInteraction000267660
      WBInteraction000269347
      WBInteraction000270852
      WBInteraction000271039
      WBInteraction000275016
      WBInteraction000275672
      WBInteraction000277709
      WBInteraction000281247
      WBInteraction000286639
      WBInteraction000287983
      WBInteraction000295959
      WBInteraction000298206
      WBInteraction000303061
      WBInteraction000307072
      WBInteraction000307265
      WBInteraction000307687
      WBInteraction000312575
      WBInteraction000314490
      WBInteraction000314655
      WBInteraction000315841
      WBInteraction000318314
      WBInteraction000318849
      WBInteraction000320393
      WBInteraction000322101
      WBInteraction000323749
      WBInteraction000326063
      WBInteraction000328244
      WBInteraction000330119
      WBInteraction000330650
      WBInteraction000334725
      WBInteraction000335809
      WBInteraction000338752
      WBInteraction000339019
      WBInteraction000342166
      WBInteraction000342990
      WBInteraction000352769
      WBInteraction000352946
      WBInteraction000353501
      WBInteraction000355479
      WBInteraction000360830
      WBInteraction000362431
      WBInteraction000372795
      WBInteraction000375389
      WBInteraction000377229
      WBInteraction000377803
      WBInteraction000391397
      WBInteraction000391541
      WBInteraction000391807
      WBInteraction000394551
      WBInteraction000395134
      WBInteraction000395800
      WBInteraction000398738
      WBInteraction000399171
      WBInteraction000399644
      WBInteraction000401602
      WBInteraction000404525
      WBInteraction000404825
      WBInteraction000405739
      WBInteraction000411824
      WBInteraction000415744
      WBInteraction000415938
      WBInteraction000416832
      WBInteraction000417512
      WBInteraction000418421
      WBInteraction000420410
      WBInteraction000424045
      WBInteraction000426623
      WBInteraction000430015
      WBInteraction000430100
      WBInteraction000434176
      WBInteraction000434771
      WBInteraction000439125
      WBInteraction000443754
      WBInteraction000456636
      WBInteraction000457714
      WBInteraction000458390
      WBInteraction000459147
      WBInteraction000460080
  Map_info: Map: V Position: 3.00411
    Positive: Positive_clone: T19B10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene