WormBase Tree Display for Gene: WBGene00011286
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| WBGene00011286 | SMap | S_parent | Sequence | R90 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-29 | |||||||
| Sequence_name | R90.4 | ||||||||
| Molecular_name | R90.4 | ||||||||
| R90.4.1 | |||||||||
| CE48192 | |||||||||
| Other_name | CELE_R90.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | ttr-29 | ||||||||
| DB_info | Database | AceView | gene | 5N388 | |||||
| WormQTL | gene | WBGene00011286 | |||||||
| WormFlux | gene | WBGene00011286 | |||||||
| NDB | locus_tag | CELE_R90.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011286|UniProtKB=Q22034 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 187890 | |||||||
| RefSeq | protein | NM_073826.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | Q22034 | |||||||
| UniProt_GCRP | UniProtAcc | Q22034 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-29 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele | WBVar00473810 | ||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01057979 | |||||||||
| WBVar01057980 | |||||||||
| WBVar01057981 | |||||||||
| WBVar01057982 | |||||||||
| WBVar01499316 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073837 | ||||||||
| 00118547 | |||||||||
| Ortholog (16) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R90.4 | |||||||
| Corresponding_CDS_history | R90.4:wp235 | ||||||||
| Corresponding_transcript | R90.4.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature | WBsf718435 | ||||||||
| WBsf234741 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052060 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017925 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034985 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018865 | ||||||||
| Expr1155693 | |||||||||
| Expr2017594 | |||||||||
| Expr2035733 | |||||||||
| Drives_construct | WBCnstr00030776 | ||||||||
| Construct_product | WBCnstr00030776 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction | WBInteraction000136478 | ||||||||
| WBInteraction000214770 | |||||||||
| WBInteraction000234423 | |||||||||
| WBInteraction000247932 | |||||||||
| WBInteraction000254506 | |||||||||
| WBInteraction000263994 | |||||||||
| WBInteraction000266666 | |||||||||
| WBInteraction000269586 | |||||||||
| WBInteraction000271682 | |||||||||
| WBInteraction000284775 | |||||||||
| WBInteraction000285616 | |||||||||
| WBInteraction000292786 | |||||||||
| WBInteraction000298022 | |||||||||
| WBInteraction000298889 | |||||||||
| WBInteraction000308324 | |||||||||
| WBInteraction000309098 | |||||||||
| WBInteraction000318660 | |||||||||
| WBInteraction000324114 | |||||||||
| WBInteraction000325702 | |||||||||
| WBInteraction000328838 | |||||||||
| WBInteraction000331658 | |||||||||
| WBInteraction000336168 | |||||||||
| WBInteraction000355776 | |||||||||
| WBInteraction000356104 | |||||||||
| WBInteraction000360518 | |||||||||
| WBInteraction000362989 | |||||||||
| WBInteraction000370878 | |||||||||
| WBInteraction000373765 | |||||||||
| WBInteraction000399388 | |||||||||
| WBInteraction000401466 | |||||||||
| WBInteraction000412670 | |||||||||
| WBInteraction000412710 | |||||||||
| WBInteraction000424016 | |||||||||
| WBInteraction000425539 | |||||||||
| WBInteraction000427200 | |||||||||
| WBInteraction000434362 | |||||||||
| WBInteraction000436500 | |||||||||
| WBInteraction000439749 | |||||||||
| WBInteraction000439907 | |||||||||
| WBInteraction000449296 | |||||||||
| WBInteraction000460685 | |||||||||
| WBInteraction000462103 | |||||||||
| WBInteraction000462179 | |||||||||
| Map_info | Map | V | Position | 4.72601 | Error | 0.000564 | |||
| Positive | Positive_clone | R90 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065331 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
