WormBase Tree Display for Gene: WBGene00010565

WBGene00010565 SMap: S_parent: Sequence: K04G2
  Identity: Version: 2
    Name: CGC_name: vacl-14 Person_evidence: WBPerson3240
      Sequence_name: K04G2.6
      Molecular_name: K04G2.6
        K04G2.6.1
        CE06100
      Other_name: CELE_K04G2.6 Accession_evidence: NDB BX284601
      Public_name: vacl-14
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 31 Aug 2012 11:56:39 WBPerson2970 Name_change: CGC_name: vacl-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vacl
    Allele (28)
    Strain: WBStrain00003373
      WBStrain00036573
    RNASeq_FPKM (74)
    GO_annotation: 00070798
      00070799
      00070800
      00070801
      00117923
      00117924
    Ortholog (39)
    Structured_description: Automated_description: Predicted to be involved in phosphatidylinositol biosynthetic process. Predicted to be located in endosome membrane. Predicted to be part of PAS complex. Human ortholog(s) of this gene implicated in striatonigral degeneration. Is an ortholog of human VAC14 (VAC14 component of PIKFYVE complex). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:4751 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:25507)
  Molecular_info: Corresponding_CDS: K04G2.6
    Corresponding_transcript: K04G2.6.1
    Other_sequence (33)
    Associated_feature: WBsf643506
      WBsf656596
      WBsf656597
      WBsf984334
      WBsf1010184
      WBsf218113
  Experimental_info: RNAi_result: WBRNAi00003920 Inferred_automatically: RNAi_primary
      WBRNAi00049939 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram226
      Expr1025063
      Expr1034613
      Expr1153644
      Expr2017955
      Expr2036091
    Drives_construct (2)
    Construct_product: WBCnstr00031321
    Microarray_results (20)
    Expression_cluster (112)
    Interaction: WBInteraction000028640
      WBInteraction000032070
      WBInteraction000049362
      WBInteraction000106476
      WBInteraction000109995
      WBInteraction000133063
      WBInteraction000185391
      WBInteraction000289010
      WBInteraction000299118
      WBInteraction000309669
      WBInteraction000313448
      WBInteraction000355207
      WBInteraction000363836
      WBInteraction000378669
      WBInteraction000384182
      WBInteraction000384450
      WBInteraction000411399
      WBInteraction000412817
      WBInteraction000418881
      WBInteraction000422237
      WBInteraction000433010
      WBInteraction000447163
      WBInteraction000451437
      WBInteraction000451629
      WBInteraction000451963
      WBInteraction000454746
      WBInteraction000455368
      WBInteraction000456262
      WBInteraction000459331
      WBInteraction000463767
      WBInteraction000465066
      WBInteraction000465146
      WBInteraction000465840
      WBInteraction000468046
      WBInteraction000473179
      WBInteraction000474954
      WBInteraction000475359
      WBInteraction000513695
      WBInteraction000513701
      WBInteraction000513702
      WBInteraction000513703
      WBInteraction000513706
      WBInteraction000513712
      WBInteraction000513716
      WBInteraction000513717
      WBInteraction000513720
      WBInteraction000513721
      WBInteraction000513726
      WBInteraction000514857
      WBInteraction000514858
      WBInteraction000514862
      WBInteraction000514863
      WBInteraction000514869
      WBInteraction000514870
      WBInteraction000514871
      WBInteraction000514874
      WBInteraction000514875
      WBInteraction000516367
      WBInteraction000516368
      WBInteraction000516371
      WBInteraction000516375
      WBInteraction000516376
      WBInteraction000516377
      WBInteraction000522853
      WBInteraction000543827
      WBInteraction000546339
      WBInteraction000559357
      WBInteraction000585053
  Map_info: Map: I Position: 2.43324
    Positive: Positive_clone: K04G2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00046969
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene