WormBase Tree Display for Gene: WBGene00009030
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WBGene00009030 | SMap | S_parent | Sequence | F21H7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-233 | Person_evidence | WBPerson2531 | |||
Sequence_name | F21H7.4 | ||||||
Molecular_name | F21H7.4 | ||||||
F21H7.4.1 | |||||||
CE15876 | |||||||
Other_name | CELE_F21H7.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | clec-233 | ||||||
DB_info | Database | AceView | gene | 5Q715 | |||
WormQTL | gene | WBGene00009030 | |||||
WormFlux | gene | WBGene00009030 | |||||
NDB | locus_tag | CELE_F21H7.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00009030|UniProtKB=O45388 | |||||
family | PTHR47517 | ||||||
NCBI | gene | 180089 | |||||
RefSeq | protein | NM_074696.5 | |||||
TREEFAM | TREEFAM_ID | TF315870 | |||||
TrEMBL | UniProtAcc | O45388 | |||||
UniProt_GCRP | UniProtAcc | O45388 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele (68) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (46) | |||||||
Paralog (126) | |||||||
Structured_description | Automated_description | Enriched in several structures, including germ line; head mesodermal cell; muscle cell; pharyngeal-intestinal valve cell; and rectal gland cell based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F21H7.4 | |||||
Corresponding_transcript | F21H7.4.1 | ||||||
Other_sequence | CSC02137_1 | ||||||
FD515894.1 | |||||||
CR05103 | |||||||
CRC02006_1 | |||||||
Associated_feature | WBsf655139 | ||||||
WBsf662144 | |||||||
WBsf662145 | |||||||
WBsf662146 | |||||||
WBsf233087 | |||||||
Experimental_info | RNAi_result | WBRNAi00112635 | Inferred_automatically | RNAi_primary | |||
WBRNAi00045257 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008678 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4945 | ||||||
Expr1010419 | |||||||
Expr1033937 | |||||||
Expr1149188 | |||||||
Expr2010139 | |||||||
Expr2028380 | |||||||
Drives_construct | WBCnstr00012358 | ||||||
WBCnstr00032511 | |||||||
Construct_product | WBCnstr00032511 | ||||||
Microarray_results (16) | |||||||
Expression_cluster (139) | |||||||
Interaction | WBInteraction000113788 | ||||||
WBInteraction000113834 | |||||||
WBInteraction000113880 | |||||||
WBInteraction000113929 | |||||||
WBInteraction000113980 | |||||||
WBInteraction000113981 | |||||||
WBInteraction000113982 | |||||||
WBInteraction000114059 | |||||||
WBInteraction000116402 | |||||||
WBInteraction000116447 | |||||||
WBInteraction000116490 | |||||||
WBInteraction000116532 | |||||||
WBInteraction000116574 | |||||||
WBInteraction000116575 | |||||||
WBInteraction000116576 | |||||||
WBInteraction000116577 | |||||||
WBInteraction000116578 | |||||||
WBInteraction000116579 | |||||||
WBInteraction000116580 | |||||||
WBInteraction000116581 | |||||||
WBInteraction000116582 | |||||||
WBInteraction000116583 | |||||||
WBInteraction000116584 | |||||||
WBInteraction000116585 | |||||||
WBInteraction000116586 | |||||||
WBInteraction000116587 | |||||||
WBInteraction000116588 | |||||||
WBInteraction000116589 | |||||||
WBInteraction000116590 | |||||||
WBInteraction000116591 | |||||||
WBInteraction000116592 | |||||||
WBInteraction000116593 | |||||||
WBInteraction000116594 | |||||||
WBInteraction000116595 | |||||||
WBInteraction000116596 | |||||||
WBInteraction000116597 | |||||||
WBInteraction000116598 | |||||||
WBInteraction000116599 | |||||||
WBInteraction000116600 | |||||||
WBInteraction000116601 | |||||||
WBInteraction000116602 | |||||||
WBInteraction000116603 | |||||||
WBInteraction000116604 | |||||||
WBInteraction000116605 | |||||||
WBInteraction000116606 | |||||||
WBInteraction000116607 | |||||||
WBInteraction000116608 | |||||||
WBInteraction000116609 | |||||||
WBInteraction000116610 | |||||||
WBInteraction000116611 | |||||||
WBInteraction000116612 | |||||||
WBInteraction000116613 | |||||||
WBInteraction000116614 | |||||||
WBInteraction000123179 | |||||||
WBInteraction000152832 | |||||||
WBInteraction000159123 | |||||||
WBInteraction000159124 | |||||||
WBInteraction000166709 | |||||||
WBInteraction000169892 | |||||||
WBInteraction000173062 | |||||||
WBInteraction000336335 | |||||||
WBInteraction000336415 | |||||||
WBInteraction000564497 | |||||||
Map_info | Map | V | Position | 9.85735 | Error | 0.001091 | |
Positive | Positive_clone | F21H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031003 | ||||||
WBPaper00031686 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |