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WormBase Tree Display for Gene: WBGene00008973

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Name Class

WBGene00008973SMapS_parentSequenceF20D1
IdentityVersion2
NameCGC_nameflwr-1
Sequence_nameF20D1.1
Molecular_nameF20D1.1
F20D1.1.1
CE09494
Other_nameCELE_F20D1.1Accession_evidenceNDBBX284606
Public_nameflwr-1
DB_infoDatabaseAceViewgeneXP588
WormQTLgeneWBGene00008973
WormFluxgeneWBGene00008973
NDBlocus_tagCELE_F20D1.1
PanthergeneCAEEL|WormBase=WBGene00008973|UniProtKB=Q93533
familyPTHR13314
NCBIgene181591
RefSeqproteinNM_078083.7
TREEFAMTREEFAM_IDTF105629
TrEMBLUniProtAccQ93533
UniProt_GCRPUniProtAccQ93533
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Jun 2020 17:41:30WBPerson1983Name_changeCGC_nameflwr-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classflwr
Allele (35)
StrainWBStrain00035299
WBStrain00032983
RNASeq_FPKM (74)
GO_annotation (11)
Ortholog (33)
Structured_descriptionAutomated_descriptionPredicted to enable calcium channel activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in synaptic vesicle membrane. Expressed in several structures, including anterior gonad arm. Is an ortholog of human CACFD1 (calcium channel flower domain containing 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF20D1.1
Corresponding_transcriptF20D1.1.1
Other_sequence (53)
Associated_featureWBsf654621
WBsf671312
WBsf671313
WBsf1008052
WBsf1008053
WBsf1008054
WBsf1024491
WBsf238272
WBsf238273
WBsf238274
Experimental_infoRNAi_resultWBRNAi00013610Inferred_automaticallyRNAi_primary
WBRNAi00033264Inferred_automaticallyRNAi_primary
WBRNAi00001605Inferred_automaticallyRNAi_primary
WBRNAi00045092Inferred_automaticallyRNAi_primary
Expr_patternChronogram896
Expr7512
Expr13092
Expr1021978
Expr1033905
Expr1149042
Expr2002778
Expr2020996
Drives_constructWBCnstr00001109
WBCnstr00012657
WBCnstr00032555
Construct_productWBCnstr00032555
Microarray_results (20)
Expression_cluster (156)
InteractionWBInteraction000032090
WBInteraction000032091
WBInteraction000181017
WBInteraction000188744
WBInteraction000192778
WBInteraction000193944
WBInteraction000207563
WBInteraction000210826
WBInteraction000223084
WBInteraction000235952
WBInteraction000242075
WBInteraction000246495
WBInteraction000248826
WBInteraction000255599
WBInteraction000258036
WBInteraction000264723
WBInteraction000268092
WBInteraction000269628
WBInteraction000269719
WBInteraction000294503
WBInteraction000296310
WBInteraction000298584
WBInteraction000306567
WBInteraction000308112
WBInteraction000309650
WBInteraction000322661
WBInteraction000322745
WBInteraction000327380
WBInteraction000330730
WBInteraction000333533
WBInteraction000338189
WBInteraction000341474
WBInteraction000342247
WBInteraction000345017
WBInteraction000346420
WBInteraction000346555
WBInteraction000353235
WBInteraction000357523
WBInteraction000359635
WBInteraction000364837
WBInteraction000372284
WBInteraction000381491
WBInteraction000385892
WBInteraction000387360
WBInteraction000389208
WBInteraction000390367
WBInteraction000394207
WBInteraction000394981
WBInteraction000399429
WBInteraction000402550
WBInteraction000407327
WBInteraction000414107
WBInteraction000415067
WBInteraction000424301
WBInteraction000428911
WBInteraction000430438
WBInteraction000433186
WBInteraction000433385
WBInteraction000435784
WBInteraction000436018
WBInteraction000442203
WBInteraction000443654
WBInteraction000444197
WBInteraction000448160
WBInteraction000452146
WBInteraction000454182
WBInteraction000458160
WBInteraction000459019
WBInteraction000511583
WBInteraction000514635
WBInteraction000544435
WBInteraction000556675
Map_info (3)
ReferenceWBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene