WormBase Tree Display for Gene: WBGene00008600
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| WBGene00008600 | SMap | S_parent | Sequence | F09A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F09A5.3 | |||||||
| Molecular_name | F09A5.3a | ||||||||
| F09A5.3a.1 | |||||||||
| CE44413 | |||||||||
| F09A5.3b | |||||||||
| CE44394 | |||||||||
| F09A5.3b.1 | |||||||||
| Other_name | CELE_F09A5.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F09A5.3 | ||||||||
| DB_info | Database | AceView | gene | XN771 | |||||
| WormQTL | gene | WBGene00008600 | |||||||
| WormFlux | gene | WBGene00008600 | |||||||
| NDB | locus_tag | CELE_F09A5.3 | |||||||
| NCBI | gene | 184220 | |||||||
| RefSeq | protein | NM_001270283.3 | |||||||
| NM_001270284.2 | |||||||||
| TrEMBL | UniProtAcc | D2YW06 | |||||||
| D2YW07 | |||||||||
| UniProt_GCRP | UniProtAcc | D2YW06 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (204) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in anterior hypodermis; arc ant V; excretory gland cell; intestine; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including let-60; daf-12; and pgl-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including allantoin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09A5.3a | |||||||
| F09A5.3b | |||||||||
| Corresponding_CDS_history | F09A5.3:wp210 | ||||||||
| Corresponding_transcript | F09A5.3a.1 | ||||||||
| F09A5.3b.1 | |||||||||
| Other_sequence | CRC08346_1 | ||||||||
| Associated_feature (25) | |||||||||
| Experimental_info | RNAi_result (2) | ||||||||
| Expr_pattern | Expr1024737 | ||||||||
| Expr1148036 | |||||||||
| Expr2002317 | |||||||||
| Expr2020536 | |||||||||
| Drives_construct | WBCnstr00032839 | ||||||||
| Construct_product | WBCnstr00032839 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (64) | |||||||||
| Interaction | WBInteraction000137553 | ||||||||
| WBInteraction000146516 | |||||||||
| WBInteraction000204623 | |||||||||
| WBInteraction000208722 | |||||||||
| WBInteraction000227365 | |||||||||
| WBInteraction000234743 | |||||||||
| WBInteraction000273626 | |||||||||
| WBInteraction000290052 | |||||||||
| WBInteraction000298421 | |||||||||
| WBInteraction000300643 | |||||||||
| WBInteraction000319435 | |||||||||
| WBInteraction000319961 | |||||||||
| WBInteraction000348522 | |||||||||
| WBInteraction000363792 | |||||||||
| WBInteraction000373810 | |||||||||
| WBInteraction000377153 | |||||||||
| WBInteraction000395885 | |||||||||
| WBInteraction000517502 | |||||||||
| WBInteraction000517507 | |||||||||
| WBInteraction000517508 | |||||||||
| WBInteraction000517509 | |||||||||
| WBInteraction000517510 | |||||||||
| WBInteraction000517511 | |||||||||
| WBInteraction000517514 | |||||||||
| WBInteraction000517515 | |||||||||
| WBInteraction000517516 | |||||||||
| WBInteraction000517517 | |||||||||
| WBInteraction000517518 | |||||||||
| WBInteraction000542489 | |||||||||
| WBInteraction000542490 | |||||||||
| Map_info | Positive | Positive_clone | F09A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 10.2149 | |||||||
| Method | Gene |
