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WormBase Tree Display for Gene: WBGene00007707

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Name Class

WBGene00007707SMapS_parentSequenceC25A1
IdentityVersion2
NameCGC_namefath-1Person_evidenceWBPerson237
Sequence_nameC25A1.5
Molecular_name (3)
Other_nameCELE_C25A1.5Accession_evidenceNDBBX284601
Public_namefath-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
216 Feb 2017 15:37:28WBPerson2970Name_changeCGC_namefath-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfath
Allele (25)
StrainWBStrain00003441
RNASeq_FPKM (74)
GO_annotation (22)
Contained_in_operonCEOP1588
Ortholog (39)
Structured_descriptionAutomated_descriptionPredicted to enable fatty acid alpha-hydroxylase activity. Predicted to be involved in fatty acid metabolic process. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 35. Is an ortholog of human FA2H (fatty acid 2-hydroxylase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0110786Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:21197)
Molecular_infoCorresponding_CDSC25A1.5
Corresponding_transcriptC25A1.5.1
Other_sequence (34)
Associated_featureWBsf656848
WBsf984933
WBsf984934
WBsf984935
WBsf1010498
WBsf1010499
WBsf218400
WBsf218401
Experimental_infoRNAi_result (43)
Expr_patternChronogram376
Expr5333
Expr1022583
Expr1033336
Expr1145178
Expr2011441
Expr2029679
Drives_constructWBCnstr00003904
WBCnstr00033541
Construct_productWBCnstr00033541
Microarray_results (21)
Expression_cluster (127)
InteractionWBInteraction000007790
WBInteraction000051038
WBInteraction000051084
WBInteraction000051130
WBInteraction000051176
WBInteraction000051222
WBInteraction000051268
WBInteraction000051307
WBInteraction000051314
WBInteraction000051335
WBInteraction000207117
WBInteraction000208780
WBInteraction000209106
WBInteraction000209698
WBInteraction000234462
WBInteraction000252639
WBInteraction000269117
WBInteraction000283491
WBInteraction000290350
WBInteraction000293965
WBInteraction000294461
WBInteraction000305669
WBInteraction000314282
WBInteraction000320255
WBInteraction000323727
WBInteraction000329853
WBInteraction000349172
WBInteraction000365665
WBInteraction000373299
WBInteraction000379351
WBInteraction000383492
WBInteraction000408190
WBInteraction000412487
WBInteraction000414192
WBInteraction000421238
WBInteraction000421799
WBInteraction000423326
WBInteraction000428122
WBInteraction000453859
WBInteraction000457105
WBInteraction000458053
WBInteraction000458452
WBInteraction000468429
WBInteraction000469857
WBInteraction000472253
WBInteraction000472770
WBInteraction000473767
WBInteraction000474263
WBInteraction000522113
WBInteraction000522151
WBInteraction000585629
Map_infoMapIPosition4.71837
PositivePositive_cloneC25A1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00026800
WBPaper00029211
WBPaper00031949
WBPaper00032961
WBPaper00038491
WBPaper00040204
WBPaper00042257
WBPaper00055090
WBPaper00055161
WBPaper00061997
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene