WormBase Tree Display for Gene: WBGene00007400

WBGene00007400 SMap: S_parent: Sequence: C07A9
  Identity: Version: 2
    Name: CGC_name: bud-31
      Sequence_name: C07A9.2
      Molecular_name: C07A9.2
        C07A9.2.1
        CE00499
        C07A9.2.2
      Other_name: 3J784 Accession_evidence: EMBL AF303257
        CELE_C07A9.2 Accession_evidence: NDB BX284603
      Public_name: bud-31
    DB_info: Database: AceView gene 3K784
        WormQTL gene WBGene00007400
        WormFlux gene WBGene00007400
        NDB locus_tag CELE_C07A9.2
        Panther gene CAEEL|WormBase=WBGene00007400|UniProtKB=P34313
          family PTHR19411
        NCBI gene 176368
        RefSeq protein NM_001379868.1
        SwissProt UniProtAcc P34313
        TREEFAM TREEFAM_ID TF105609
        UniProt_GCRP UniProtAcc P34313
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Apr 2017 11:17:23 WBPerson2970 Name_change: CGC_name: bud-31
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: bud
    Allele (27)
    Strain: WBStrain00051144
    RNASeq_FPKM (74)
    GO_annotation: 00041550
      00041551
      00041552
      00041553
      00041554
      00041555
      00041556
      00115537
    Contained_in_operon: CEOP3612
    Ortholog (34)
    Structured_description: Automated_description: Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Is an ortholog of human BUD31 (BUD31 homolog). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07A9.2
    Corresponding_transcript: C07A9.2.1
      C07A9.2.2
    Other_sequence (74)
    Associated_feature: WBsf651395
      WBsf651396
      WBsf667314
      WBsf667315
      WBsf667316
      WBsf993765
      WBsf993766
      WBsf1015654
      WBsf1015655
      WBsf227352
  Experimental_info: RNAi_result (24)
    Expr_pattern (5)
    Drives_construct: WBCnstr00033770
    Construct_product: WBCnstr00033770
    Microarray_results (23)
    Expression_cluster (135)
    Interaction: WBInteraction000007888
      WBInteraction000035728
      WBInteraction000036315
      WBInteraction000038177
      WBInteraction000039968
      WBInteraction000040636
      WBInteraction000040810
      WBInteraction000042695
      WBInteraction000042698
      WBInteraction000042699
      WBInteraction000042700
      WBInteraction000042701
      WBInteraction000043448
      WBInteraction000043965
      WBInteraction000044233
      WBInteraction000044234
      WBInteraction000044241
      WBInteraction000044242
      WBInteraction000045648
      WBInteraction000045650
      WBInteraction000045654
      WBInteraction000045655
      WBInteraction000045656
      WBInteraction000045657
      WBInteraction000045658
      WBInteraction000045659
      WBInteraction000045660
      WBInteraction000045661
      WBInteraction000045662
      WBInteraction000045663
      WBInteraction000045664
      WBInteraction000045665
      WBInteraction000045666
      WBInteraction000045667
      WBInteraction000047088
      WBInteraction000047187
      WBInteraction000048854
      WBInteraction000048864
      WBInteraction000048867
      WBInteraction000048868
      WBInteraction000048869
      WBInteraction000048870
      WBInteraction000048871
      WBInteraction000048872
      WBInteraction000049011
      WBInteraction000050010
      WBInteraction000125135
      WBInteraction000136249
      WBInteraction000138977
      WBInteraction000188607
      WBInteraction000254869
      WBInteraction000259550
      WBInteraction000266483
      WBInteraction000271258
      WBInteraction000299740
      WBInteraction000305574
      WBInteraction000309363
      WBInteraction000314850
      WBInteraction000316021
      WBInteraction000322394
      WBInteraction000332803
      WBInteraction000333109
      WBInteraction000341836
      WBInteraction000344172
      WBInteraction000357373
      WBInteraction000357868
      WBInteraction000365927
      WBInteraction000379186
      WBInteraction000386405
      WBInteraction000386406
      WBInteraction000390058
      WBInteraction000394735
      WBInteraction000397739
      WBInteraction000399519
      WBInteraction000410174
      WBInteraction000411110
      WBInteraction000412933
      WBInteraction000413378
      WBInteraction000417882
      WBInteraction000423799
      WBInteraction000425267
      WBInteraction000426598
      WBInteraction000430852
      WBInteraction000432454
      WBInteraction000443003
      WBInteraction000459490
      WBInteraction000462223
      WBInteraction000462298
      WBInteraction000462951
      WBInteraction000463536
      WBInteraction000467346
      WBInteraction000469999
      WBInteraction000470874
      WBInteraction000472176
      WBInteraction000549173
      WBInteraction000555425
      WBInteraction000559060
      WBInteraction000566851
      WBInteraction000568440
      WBInteraction000570207
      WBInteraction000576220
      WBInteraction000582204
  Map_info: Map: III Position: 0.890235
    Positive: Positive_clone: C07A9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00045396
    WBPaper00048493
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene