WormBase Tree Display for Gene: WBGene00007256

WBGene00007256 SMap: S_parent: Sequence: C01H6
  Identity: Version: 3
    Name: CGC_name: swsn-9 Person_evidence: WBPerson260
            WBPerson407
      Sequence_name: C01H6.7
      Molecular_name: C01H6.7a
        C01H6.7a.1
        CE05190
        C01H6.7b
        CE40891
        C01H6.7a.2
        C01H6.7b.1
      Other_name: tag-298
        CELE_C01H6.7 Accession_evidence: NDB BX284601
      Public_name: swsn-9
    DB_info: Database: AceView gene 1H803
        WormQTL gene WBGene00007256
        WormFlux gene WBGene00007256
        NDB locus_tag CELE_C01H6.7
        Panther gene CAEEL|WormBase=WBGene00007256|UniProtKB=Q17581
          family PTHR22881
        NCBI gene 172461
        RefSeq protein NM_001380647.2
            NM_001380648.1
        TREEFAM TREEFAM_ID TF106439
        TrEMBL UniProtAcc A5JYT2
            Q17581
        UniProt_GCRP UniProtAcc Q17581
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Apr 2005 11:55:18 WBPerson2970 Name_change: CGC_name: tag-298
        3 29 Aug 2012 16:38:19 WBPerson2970 Name_change: CGC_name: swsn-9
                Other_name: tag-298
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: swsn
    Allele (30)
    Strain: WBStrain00036150
    RNASeq_FPKM (74)
    GO_annotation: 00004716
      00004717
      00004718
    Contained_in_operon: CEOP1372
    Ortholog (37)
    Structured_description: Automated_description: Predicted to enable lysine-acetylated histone binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in muscle cell; pharynx; and somatic gonad. Used to study alcohol use disorder. Human ortholog(s) of this gene implicated in acute myeloid leukemia; carcinoma (multiple); and glioblastoma. Is an ortholog of human BRD7 (bromodomain containing 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:1574 Homo sapiens Paper_evidence: WBPaper00046494
          Curator_confirmed: WBPerson324
          Date_last_updated: 20 May 2019 00:00:00
    Potential_model: DOID:3068 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
      DOID:3908 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
      DOID:2152 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
      DOID:3070 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
      DOID:0080199 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
      DOID:3069 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
      DOID:9119 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:14310)
  Models_disease_asserted: WBDOannot00000670
  Molecular_info: Corresponding_CDS (2)
    Corresponding_transcript: C01H6.7a.1
      C01H6.7a.2
      C01H6.7b.1
    Other_sequence (20)
    Associated_feature (12)
  Experimental_info: RNAi_result (16)
    Expr_pattern: Expr12274
      Expr1012233
      Expr1033129
      Expr1143490
      Expr2017162
      Expr2035298
    Drives_construct: WBCnstr00020252
      WBCnstr00020253
      WBCnstr00037870
    Construct_product: WBCnstr00020252
      WBCnstr00020253
      WBCnstr00037870
    Regulate_expr_cluster: WBPaper00060764:swsn-9(ok1354)_downregulated
      WBPaper00060764:swsn-9(ok1354)_upregulated
    Microarray_results (23)
    Expression_cluster (168)
    SAGE_tag (14)
    Interaction: WBInteraction000006069
      WBInteraction000006196
      WBInteraction000006215
      WBInteraction000006317
      WBInteraction000006337
      WBInteraction000029186
      WBInteraction000031207
      WBInteraction000116391
      WBInteraction000133726
      WBInteraction000190978
      WBInteraction000212038
      WBInteraction000230334
      WBInteraction000240559
      WBInteraction000252530
      WBInteraction000260366
      WBInteraction000262339
      WBInteraction000268679
      WBInteraction000300815
      WBInteraction000302085
      WBInteraction000302788
      WBInteraction000304156
      WBInteraction000305784
      WBInteraction000306360
      WBInteraction000307727
      WBInteraction000308318
      WBInteraction000308870
      WBInteraction000309766
      WBInteraction000312010
      WBInteraction000314040
      WBInteraction000314812
      WBInteraction000322648
      WBInteraction000323877
      WBInteraction000327465
      WBInteraction000329336
      WBInteraction000329892
      WBInteraction000333783
      WBInteraction000341862
      WBInteraction000345589
      WBInteraction000351213
      WBInteraction000351494
      WBInteraction000352070
      WBInteraction000357212
      WBInteraction000361644
      WBInteraction000361645
      WBInteraction000361646
      WBInteraction000361647
      WBInteraction000361648
      WBInteraction000361649
      WBInteraction000361650
      WBInteraction000361651
      WBInteraction000361652
      WBInteraction000361653
      WBInteraction000361654
      WBInteraction000361655
      WBInteraction000361656
      WBInteraction000361657
      WBInteraction000361658
      WBInteraction000361659
      WBInteraction000364791
      WBInteraction000368072
      WBInteraction000375123
      WBInteraction000381320
      WBInteraction000382003
      WBInteraction000388454
      WBInteraction000402103
      WBInteraction000402849
      WBInteraction000414426
      WBInteraction000415231
      WBInteraction000416651
      WBInteraction000428433
      WBInteraction000435956
      WBInteraction000437197
      WBInteraction000442217
      WBInteraction000442524
      WBInteraction000443728
      WBInteraction000447502
      WBInteraction000457602
      WBInteraction000457789
      WBInteraction000512400
      WBInteraction000520891
      WBInteraction000520916
      WBInteraction000520926
      WBInteraction000543044
      WBInteraction000544390
      WBInteraction000546902
      WBInteraction000559036
      WBInteraction000561268
      WBInteraction000574275
      WBInteraction000574601
      WBInteraction000575475
      WBInteraction000577267
  Map_info: Map: I Position: 1.84959 Error: 0.001697
    Positive: Positive_clone: C01H6 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5165
        4477
        4521
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene