WormBase Tree Display for Gene: WBGene00005012
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| WBGene00005012 | SMap | S_parent | Sequence | F26F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F26F4.2 | |||||||
| Molecular_name | F26F4.2 | ||||||||
| F26F4.2.1 | |||||||||
| CE29288 | |||||||||
| Other_name | CELE_F26F4.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F26F4.2 | ||||||||
| DB_info | Database | AceView | gene | 3G1 | |||||
| WormQTL | gene | WBGene00005012 | |||||||
| WormFlux | gene | WBGene00005012 | |||||||
| NDB | locus_tag | CELE_F26F4.2 | |||||||
| NCBI | gene | 184988 | |||||||
| RefSeq | protein | NM_065631.5 | |||||||
| TREEFAM | TREEFAM_ID | TF318013 | |||||||
| TrEMBL | UniProtAcc | Q19823 | |||||||
| UniProt_GCRP | UniProtAcc | Q19823 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 26 Aug 2004 09:35:47 | WBPerson1971 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01999572 | ||||||||
| WBVar01566377 | |||||||||
| WBVar00824593 | |||||||||
| WBVar00824594 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00009501 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | F26F4.2 encodes a novel protein with high similarity to C. elegans F37A8.1 and C. briggsae CBG18186. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jul 2007 00:00:00 | ||||||||
| Automated_description | Enriched in RIC; germ line; intestine; sperm; and in male based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and rrf-3 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; allantoin; and Sirolimus based on microarray; RNA-seq; and proteomic studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F26F4.2 | |||||||
| Corresponding_transcript | F26F4.2.1 | ||||||||
| Other_sequence | CJC05297_1 | ||||||||
| Associated_feature | WBsf224825 | ||||||||
| Experimental_info | RNAi_result (4) | ||||||||
| Expr_pattern | Expr1019910 | ||||||||
| Expr1032496 | |||||||||
| Expr1149586 | |||||||||
| Expr2003035 | |||||||||
| Expr2021249 | |||||||||
| Drives_construct | WBCnstr00035268 | ||||||||
| Construct_product | WBCnstr00035268 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000031553 | ||||||||
| WBInteraction000180591 | |||||||||
| WBInteraction000193423 | |||||||||
| WBInteraction000198115 | |||||||||
| WBInteraction000211251 | |||||||||
| WBInteraction000218938 | |||||||||
| WBInteraction000219153 | |||||||||
| WBInteraction000228836 | |||||||||
| WBInteraction000245597 | |||||||||
| WBInteraction000249122 | |||||||||
| WBInteraction000269854 | |||||||||
| WBInteraction000282774 | |||||||||
| WBInteraction000285236 | |||||||||
| WBInteraction000296065 | |||||||||
| WBInteraction000299214 | |||||||||
| WBInteraction000302355 | |||||||||
| WBInteraction000306725 | |||||||||
| WBInteraction000333436 | |||||||||
| WBInteraction000348811 | |||||||||
| WBInteraction000351036 | |||||||||
| WBInteraction000363547 | |||||||||
| WBInteraction000378204 | |||||||||
| WBInteraction000381153 | |||||||||
| WBInteraction000384881 | |||||||||
| WBInteraction000384965 | |||||||||
| WBInteraction000395949 | |||||||||
| WBInteraction000398829 | |||||||||
| WBInteraction000411567 | |||||||||
| WBInteraction000413443 | |||||||||
| WBInteraction000415037 | |||||||||
| WBInteraction000421296 | |||||||||
| WBInteraction000426356 | |||||||||
| WBInteraction000432887 | |||||||||
| WBInteraction000445172 | |||||||||
| WBInteraction000445418 | |||||||||
| WBInteraction000447108 | |||||||||
| WBInteraction000455069 | |||||||||
| WBInteraction000503148 | |||||||||
| WBInteraction000513222 | |||||||||
| WBInteraction000563839 | |||||||||
| Map_info | Positive | Positive_clone | F26F4 | Inferred_automatically | From CDS info | ||||
| From sequence, transcript, pseudogene data | |||||||||
| Interpolated_map_position | III | -2.38345 | |||||||
| Remark | This gene was previously incorrectly identified as spt-1 based on an unintended error in the CGC strain data files | Curator_confirmed | WBPerson1971 | ||||||
| Method | Gene |
