WormBase Tree Display for Gene: WBGene00004442

WBGene00004442 SMap: S_parent: Sequence: R11D1
  Identity: Version: 1
    Name: CGC_name: rpl-28
      Sequence_name: R11D1.8
      Molecular_name: R11D1.8
        R11D1.8.1
        CE06313
        R11D1.8.2
      Other_name: CELE_R11D1.8 Accession_evidence: NDB BX284605
      Public_name: rpl-28
    DB_info: Database: AceView gene 5N208
        WormQTL gene WBGene00004442
        WormFlux gene WBGene00004442
        NDB locus_tag CELE_R11D1.8
        Panther gene CAEEL|WormBase=WBGene00004442|UniProtKB=Q21930
          family PTHR10544
        NCBI gene 179739
        RefSeq protein NM_001383425.2
        SwissProt UniProtAcc Q21930
        TREEFAM TREEFAM_ID TF300173
        UniProt_GCRP UniProtAcc Q21930
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpl
    Allele (19)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rpl28 using blastP
    Strain: WBStrain00003488
      WBStrain00003489
    RNASeq_FPKM (74)
    GO_annotation: 00073393
      00073394
      00073395
      00073396
      00073397
      00112886
      00112887
      00112888
    Ortholog (35)
    Structured_description: Concise_description: rpl-28 encodes a large ribosomal subunit L28 protein. Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is an ortholog of human RPL28 (ribosomal protein L28). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R11D1.8
    Corresponding_transcript: R11D1.8.1
      R11D1.8.2
    Other_sequence (91)
    Associated_feature: WBsf655599
      WBsf234714
  Experimental_info: RNAi_result: WBRNAi00026092 Inferred_automatically: RNAi_primary
      WBRNAi00051784 Inferred_automatically: RNAi_primary
      WBRNAi00026093 Inferred_automatically: RNAi_primary
      WBRNAi00017749 Inferred_automatically: RNAi_primary
      WBRNAi00033333 Inferred_automatically: RNAi_primary
      WBRNAi00111678 Inferred_automatically: RNAi_primary
      WBRNAi00051783 Inferred_automatically: RNAi_primary
      WBRNAi00027440 Inferred_automatically: RNAi_primary
      WBRNAi00051785 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram432
      Expr6505
      Expr6506
      Expr1027130
      Expr1032246
      Expr1155447
      Expr2015459
      Expr2033694
    Drives_construct (33)
    Construct_product (2)
    Microarray_results (21)
    Expression_cluster (168)
    Interaction: WBInteraction000031623
      WBInteraction000031651
      WBInteraction000106316
      WBInteraction000107454
      WBInteraction000107482
      WBInteraction000107503
      WBInteraction000107529
      WBInteraction000107566
      WBInteraction000107595
      WBInteraction000107618
      WBInteraction000107631
      WBInteraction000107650
      WBInteraction000107664
      WBInteraction000107675
      WBInteraction000107706
      WBInteraction000107725
      WBInteraction000107752
      WBInteraction000107792
      WBInteraction000107828
      WBInteraction000107859
      WBInteraction000107879
      WBInteraction000107898
      WBInteraction000107915
      WBInteraction000107940
      WBInteraction000107950
      WBInteraction000107951
      WBInteraction000107952
      WBInteraction000107953
      WBInteraction000107954
      WBInteraction000107955
      WBInteraction000107956
      WBInteraction000107957
      WBInteraction000107958
      WBInteraction000107959
      WBInteraction000107960
      WBInteraction000107961
      WBInteraction000107962
      WBInteraction000107963
      WBInteraction000107964
      WBInteraction000107965
      WBInteraction000107966
      WBInteraction000107993
      WBInteraction000108059
      WBInteraction000108093
      WBInteraction000108121
      WBInteraction000108152
      WBInteraction000108190
      WBInteraction000108232
      WBInteraction000108273
      WBInteraction000108751
      WBInteraction000116342
      WBInteraction000124319
      WBInteraction000125147
      WBInteraction000127977
      WBInteraction000128011
      WBInteraction000129241
      WBInteraction000129242
      WBInteraction000129243
      WBInteraction000129244
      WBInteraction000129245
      WBInteraction000129246
      WBInteraction000129247
      WBInteraction000129248
      WBInteraction000129249
      WBInteraction000129250
      WBInteraction000129251
      WBInteraction000129252
      WBInteraction000129468
      WBInteraction000129502
      WBInteraction000129527
      WBInteraction000129557
      WBInteraction000129604
      WBInteraction000129629
      WBInteraction000129705
      WBInteraction000129740
      WBInteraction000129766
      WBInteraction000129786
      WBInteraction000129872
      WBInteraction000129915
      WBInteraction000129950
      WBInteraction000129971
      WBInteraction000129999
      WBInteraction000130050
      WBInteraction000130105
      WBInteraction000130624
      WBInteraction000153709
      WBInteraction000153755
      WBInteraction000153794
      WBInteraction000153836
      WBInteraction000153867
      WBInteraction000153902
      WBInteraction000154006
      WBInteraction000154038
      WBInteraction000154061
      WBInteraction000154797
      WBInteraction000154798
      WBInteraction000154799
      WBInteraction000154800
      WBInteraction000154801
      WBInteraction000154802
      WBInteraction000154803
      WBInteraction000154804
      WBInteraction000155395
      WBInteraction000155628
      WBInteraction000156083
      WBInteraction000156276
      WBInteraction000156612
      WBInteraction000171177
      WBInteraction000179913
      WBInteraction000228052
      WBInteraction000235104
      WBInteraction000282999
      WBInteraction000359128
      WBInteraction000384319
      WBInteraction000414034
      WBInteraction000432715
      WBInteraction000439186
      WBInteraction000448044
      WBInteraction000549112
      WBInteraction000551959
      WBInteraction000554010
      WBInteraction000555115
      WBInteraction000555558
      WBInteraction000555633
      WBInteraction000555917
      WBInteraction000559905
      WBInteraction000561757
      WBInteraction000562193
      WBInteraction000564218
      WBInteraction000569267
      WBInteraction000570651
      WBInteraction000570955
      WBInteraction000572265
      WBInteraction000572495
      WBInteraction000572876
      WBInteraction000577724
      WBInteraction000578951
      WBInteraction000580333
      WBInteraction000584676
      WBInteraction000585166
      WBInteraction000586020
  Map_info: Map: V Position: 4.61576 Error: 0.000286
    Positive: Positive_clone: R11D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00057217
    WBPaper00061952
    WBPaper00062385
    WBPaper00064403
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene