WormBase Tree Display for Gene: WBGene00003429

WBGene00003429 SMap: S_parent: Sequence: R05F9
  Identity: Version: 1
    Name: CGC_name: msp-31 Person_evidence: WBPerson680
      Sequence_name: R05F9.13
      Molecular_name: R05F9.13
        R05F9.13.1
        CE02806
      Other_name: CELE_R05F9.13 Accession_evidence: NDB BX284602
      Public_name: msp-31
    DB_info: Database: AceView gene 2F208
        WormQTL gene WBGene00003429
        WormFlux gene WBGene00003429
        NDB locus_tag CELE_R05F9.13
        NCBI gene 173849
        RefSeq protein NM_062497.6
        SwissProt UniProtAcc P53017
        UniProt_GCRP UniProtAcc P53017
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:31 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: msp
    Allele: WBVar01499702
      WBVar01498435
      WBVar00365083
      WBVar00365084
      WBVar00728877
    Legacy_information: [C.elegansII] NMK. Encodes MSP (16kD); msp-152 cluster. [Ward et al. (1988); BA]
    RNASeq_FPKM (74)
    Ortholog (10)
    Paralog (49)
    Structured_description: Concise_description: msp-31 encodes a member of the major sperm protein family; msp-31 has a C. briggsae homolog as predicted by the Wobble Aware Bulk Aligner (WABA); expression is enriched in sperm. Paper_evidence: WBPaper00004280
            WBPaper00004349
          Curator_confirmed: WBPerson48
            WBPerson324
          Date_last_updated: 06 May 2005 00:00:00
      Automated_description: Expressed in gonad; oocyte; and sperm. Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R05F9.13
    Corresponding_transcript: R05F9.13.1
    Other_sequence (15)
    Associated_feature: WBsf222975
  Experimental_info: RNAi_result (24)
    Expr_pattern: Expr3417
      Expr1031589
      Expr1155006
      Expr2032009
    Drives_construct: WBCnstr00036123
    Construct_product: WBCnstr00036123
    Antibody: WBAntibody00000037
      WBAntibody00000038
      WBAntibody00000854
      WBAntibody00000855
      WBAntibody00000856
      WBAntibody00000857
      WBAntibody00000858
    Microarray_results (23)
    Expression_cluster (211)
    Interaction: WBInteraction000100828
      WBInteraction000100922
      WBInteraction000101466
      WBInteraction000102467
      WBInteraction000102563
      WBInteraction000103147
      WBInteraction000103320
      WBInteraction000103517
      WBInteraction000103593
      WBInteraction000103602
      WBInteraction000103958
      WBInteraction000104584
      WBInteraction000104741
      WBInteraction000105399
      WBInteraction000106523
      WBInteraction000107006
      WBInteraction000107285
      WBInteraction000107394
      WBInteraction000107403
      WBInteraction000110341
      WBInteraction000112315
      WBInteraction000113196
      WBInteraction000114825
      WBInteraction000115086
      WBInteraction000117686
      WBInteraction000117694
      WBInteraction000118320
      WBInteraction000118405
      WBInteraction000119282
      WBInteraction000119573
      WBInteraction000119748
      WBInteraction000120195
      WBInteraction000120658
      WBInteraction000120697
      WBInteraction000121486
      WBInteraction000124269
      WBInteraction000126034
      WBInteraction000133753
      WBInteraction000134212
      WBInteraction000143201
      WBInteraction000143593
      WBInteraction000144376
      WBInteraction000146290
      WBInteraction000147362
      WBInteraction000147820
      WBInteraction000150762
      WBInteraction000151434
      WBInteraction000151436
      WBInteraction000151780
      WBInteraction000152092
      WBInteraction000152169
      WBInteraction000152982
      WBInteraction000157134
      WBInteraction000160268
      WBInteraction000161614
      WBInteraction000162699
      WBInteraction000163547
      WBInteraction000171643
      WBInteraction000171671
      WBInteraction000171809
      WBInteraction000174580
      WBInteraction000175908
      WBInteraction000177544
      WBInteraction000180082
      WBInteraction000181348
      WBInteraction000181724
      WBInteraction000181826
      WBInteraction000181928
      WBInteraction000182496
      WBInteraction000182959
      WBInteraction000183995
      WBInteraction000184117
      WBInteraction000184846
      WBInteraction000185894
      WBInteraction000193934
      WBInteraction000194159
      WBInteraction000198658
      WBInteraction000203484
      WBInteraction000205160
      WBInteraction000210101
      WBInteraction000210260
      WBInteraction000211036
      WBInteraction000212146
      WBInteraction000215157
      WBInteraction000215965
      WBInteraction000223884
      WBInteraction000227876
      WBInteraction000228510
      WBInteraction000228980
      WBInteraction000235249
      WBInteraction000235624
      WBInteraction000237715
      WBInteraction000237777
      WBInteraction000238952
      WBInteraction000244625
      WBInteraction000245023
      WBInteraction000247111
      WBInteraction000247590
      WBInteraction000249551
      WBInteraction000255749
      WBInteraction000257633
      WBInteraction000258103
      WBInteraction000263640
      WBInteraction000263826
      WBInteraction000264335
      WBInteraction000264546
      WBInteraction000268880
      WBInteraction000269782
      WBInteraction000270188
      WBInteraction000271938
      WBInteraction000272276
      WBInteraction000272744
      WBInteraction000275541
      WBInteraction000277704
      WBInteraction000279119
      WBInteraction000280636
      WBInteraction000281068
      WBInteraction000281886
      WBInteraction000288262
      WBInteraction000290973
      WBInteraction000294845
      WBInteraction000295751
      WBInteraction000296807
      WBInteraction000297761
      WBInteraction000299917
      WBInteraction000300893
      WBInteraction000301421
      WBInteraction000302394
      WBInteraction000303218
      WBInteraction000303488
      WBInteraction000306245
      WBInteraction000310698
      WBInteraction000311962
      WBInteraction000314746
      WBInteraction000321933
      WBInteraction000322126
      WBInteraction000322677
      WBInteraction000323455
      WBInteraction000324871
      WBInteraction000325198
      WBInteraction000330576
      WBInteraction000332345
      WBInteraction000333733
      WBInteraction000345210
      WBInteraction000346630
      WBInteraction000347896
      WBInteraction000350678
      WBInteraction000350713
      WBInteraction000350967
      WBInteraction000352849
      WBInteraction000354206
      WBInteraction000357269
      WBInteraction000358256
      WBInteraction000360149
      WBInteraction000360274
      WBInteraction000361355
      WBInteraction000361549
      WBInteraction000366058
      WBInteraction000367852
      WBInteraction000377127
      WBInteraction000378744
      WBInteraction000380013
      WBInteraction000381307
      WBInteraction000382488
      WBInteraction000383304
      WBInteraction000383973
      WBInteraction000386982
      WBInteraction000387023
      WBInteraction000389865
      WBInteraction000392980
      WBInteraction000395424
      WBInteraction000397089
      WBInteraction000398961
      WBInteraction000399227
      WBInteraction000399535
      WBInteraction000401822
      WBInteraction000402121
      WBInteraction000404881
      WBInteraction000405092
      WBInteraction000409419
      WBInteraction000410705
      WBInteraction000410959
      WBInteraction000411706
      WBInteraction000411752
      WBInteraction000411829
      WBInteraction000413977
      WBInteraction000416865
      WBInteraction000417832
      WBInteraction000418431
      WBInteraction000418981
      WBInteraction000420933
      WBInteraction000423259
      WBInteraction000427171
      WBInteraction000427787
      WBInteraction000431148
      WBInteraction000434068
      WBInteraction000436449
      WBInteraction000441214
      WBInteraction000442944
      WBInteraction000445724
      WBInteraction000448047
      WBInteraction000449991
      WBInteraction000450442
      WBInteraction000456195
      WBInteraction000457964
      WBInteraction000461539
      WBInteraction000462723
  Map_info: Map: II Position: -2.9184 Error: 0.003712
    Positive: Positive_clone: R05F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00001023
    WBPaper00004349
    WBPaper00015440
    WBPaper00024312
    WBPaper00025088
    WBPaper00057218
  Remark: Map II position -3
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene