WormBase Tree Display for Gene: WBGene00002064

WBGene00002064 SMap: S_parent: Sequence: T05G5
  Identity: Version: 1
    Name: CGC_name: iff-1 Person_evidence: WBPerson284
      Sequence_name: T05G5.10
      Molecular_name: T05G5.10a
        T05G5.10a.1
        CE37787
        T05G5.10b
        CE00503
        T05G5.10c
        CE46328
        T05G5.10b.1
        T05G5.10c.1
      Other_name: CELE_T05G5.10 Accession_evidence: NDB BX284603
      Public_name: iff-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: iff
    Allele (19)
    Strain: WBStrain00022686
      WBStrain00022688
    RNASeq_FPKM (74)
    GO_annotation (24)
    Ortholog (38)
    Paralog: WBGene00002065 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Concise_description: iff-1 encodes an eIF-5A homolog that affects fertility and is required for germ cell proliferation and for some P granule components to localize properly; expression is germline specific and mRNA is expressed in the distal region of gonads where germ cells actively proliferate. Paper_evidence (2)
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable translation elongation factor activity. Involved in gamete generation and protein localization. Predicted to be located in cytoplasm. Expressed in germ line and gonad. Human ortholog(s) of this gene implicated in colorectal cancer. Is an ortholog of human EIF5A (eukaryotic translation initiation factor 5A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:9256 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3300)
  Molecular_info: Corresponding_CDS: T05G5.10a
      T05G5.10b
      T05G5.10c
    Corresponding_CDS_history: T05G5.10:wp135
    Corresponding_transcript: T05G5.10a.1
      T05G5.10b.1
      T05G5.10c.1
    Other_sequence (107)
    Associated_feature: WBsf651400
      WBsf667319
      WBsf667320
      WBsf993786
      WBsf1015666
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr2909
      Expr2911
      Expr2912
      Expr1021225
      Expr1031217
      Expr1156177
      Expr2012691
      Expr2030927
    Drives_construct: WBCnstr00036483
    Construct_product: WBCnstr00036483
    Regulate_expr_cluster: WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_upregulated_protein
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
    Antibody: WBAntibody00000726
    Microarray_results (23)
    Expression_cluster (235)
    Interaction: WBInteraction000009800
      WBInteraction000028405
      WBInteraction000028408
      WBInteraction000029279
      WBInteraction000030891
      WBInteraction000034364
      WBInteraction000034513
      WBInteraction000034667
      WBInteraction000035942
      WBInteraction000037567
      WBInteraction000037577
      WBInteraction000037760
      WBInteraction000038488
      WBInteraction000038600
      WBInteraction000040195
      WBInteraction000040620
      WBInteraction000041749
      WBInteraction000041763
      WBInteraction000041920
      WBInteraction000042245
      WBInteraction000042386
      WBInteraction000043680
      WBInteraction000044288
      WBInteraction000044978
      WBInteraction000046764
      WBInteraction000047739
      WBInteraction000048203
      WBInteraction000048485
      WBInteraction000048824
      WBInteraction000049351
      WBInteraction000049483
      WBInteraction000049484
      WBInteraction000049485
      WBInteraction000049486
      WBInteraction000103552
      WBInteraction000104913
      WBInteraction000105117
      WBInteraction000105539
      WBInteraction000110962
      WBInteraction000112900
      WBInteraction000115487
      WBInteraction000117565
      WBInteraction000118121
      WBInteraction000119442
      WBInteraction000120197
      WBInteraction000120256
      WBInteraction000120513
      WBInteraction000137762
      WBInteraction000138394
      WBInteraction000138507
      WBInteraction000138757
      WBInteraction000139084
      WBInteraction000142863
      WBInteraction000143738
      WBInteraction000143739
      WBInteraction000159835
      WBInteraction000165273
      WBInteraction000170637
      WBInteraction000173394
      WBInteraction000174092
      WBInteraction000177406
      WBInteraction000184788
      WBInteraction000189054
      WBInteraction000192176
      WBInteraction000198425
      WBInteraction000199477
      WBInteraction000205485
      WBInteraction000205645
      WBInteraction000206949
      WBInteraction000207194
      WBInteraction000213519
      WBInteraction000214921
      WBInteraction000220618
      WBInteraction000221313
      WBInteraction000222640
      WBInteraction000225647
      WBInteraction000228338
      WBInteraction000229348
      WBInteraction000234980
      WBInteraction000235884
      WBInteraction000241407
      WBInteraction000242922
      WBInteraction000244840
      WBInteraction000245177
      WBInteraction000258207
      WBInteraction000260333
      WBInteraction000264818
      WBInteraction000268714
      WBInteraction000272426
      WBInteraction000275822
      WBInteraction000279835
      WBInteraction000282484
      WBInteraction000287105
      WBInteraction000292013
      WBInteraction000299802
      WBInteraction000300126
      WBInteraction000301536
      WBInteraction000303196
      WBInteraction000303719
      WBInteraction000304055
      WBInteraction000304332
      WBInteraction000307724
      WBInteraction000308501
      WBInteraction000311010
      WBInteraction000312914
      WBInteraction000315806
      WBInteraction000317176
      WBInteraction000321192
      WBInteraction000322519
      WBInteraction000324339
      WBInteraction000332199
      WBInteraction000333312
      WBInteraction000333333
      WBInteraction000333937
      WBInteraction000337601
      WBInteraction000339066
      WBInteraction000340216
      WBInteraction000341308
      WBInteraction000342940
      WBInteraction000346609
      WBInteraction000346742
      WBInteraction000349623
      WBInteraction000350438
      WBInteraction000352574
      WBInteraction000353560
      WBInteraction000353763
      WBInteraction000355691
      WBInteraction000358297
      WBInteraction000359975
      WBInteraction000360602
      WBInteraction000364192
      WBInteraction000367887
      WBInteraction000369672
      WBInteraction000371922
      WBInteraction000373843
      WBInteraction000385019
      WBInteraction000387245
      WBInteraction000387257
      WBInteraction000387538
      WBInteraction000389824
      WBInteraction000394510
      WBInteraction000396688
      WBInteraction000396755
      WBInteraction000396784
      WBInteraction000400607
      WBInteraction000400997
      WBInteraction000401453
      WBInteraction000403671
      WBInteraction000405429
      WBInteraction000405971
      WBInteraction000407009
      WBInteraction000410557
      WBInteraction000413052
      WBInteraction000414311
      WBInteraction000414823
      WBInteraction000417274
      WBInteraction000418064
      WBInteraction000418113
      WBInteraction000420713
      WBInteraction000425651
      WBInteraction000426608
      WBInteraction000427134
      WBInteraction000428545
      WBInteraction000430180
      WBInteraction000431564
      WBInteraction000433704
      WBInteraction000435742
      WBInteraction000435943
      WBInteraction000436846
      WBInteraction000440202
      WBInteraction000440994
      WBInteraction000441559
      WBInteraction000446341
      WBInteraction000447072
      WBInteraction000447664
      WBInteraction000448073
      WBInteraction000448393
      WBInteraction000450964
      WBInteraction000450965
      WBInteraction000451974
      WBInteraction000452001
      WBInteraction000457418
      WBInteraction000457737
      WBInteraction000459197
      WBInteraction000459457
      WBInteraction000462063
      WBInteraction000463507
      WBInteraction000464613
      WBInteraction000464852
      WBInteraction000464948
      WBInteraction000468972
      WBInteraction000469151
      WBInteraction000469152
      WBInteraction000470588
      WBInteraction000470667
      WBInteraction000471047
      WBInteraction000471378
      WBInteraction000471776
      WBInteraction000471823
      WBInteraction000501509
      WBInteraction000501510
      WBInteraction000501511
      WBInteraction000510971
      WBInteraction000510972
      WBInteraction000510973
      WBInteraction000510974
      WBInteraction000510975
      WBInteraction000510976
      WBInteraction000510977
      WBInteraction000510978
      WBInteraction000510979
      WBInteraction000510980
      WBInteraction000510981
      WBInteraction000510982
      WBInteraction000510983
      WBInteraction000510984
      WBInteraction000510985
      WBInteraction000510986
      WBInteraction000510987
      WBInteraction000510988
      WBInteraction000510989
      WBInteraction000510990
      WBInteraction000510991
      WBInteraction000510992
      WBInteraction000510993
      WBInteraction000510994
      WBInteraction000510995
      WBInteraction000510996
      WBInteraction000510997
      WBInteraction000510998
      WBInteraction000510999
      WBInteraction000511000
      WBInteraction000511001
      WBInteraction000511002
      WBInteraction000511003
      WBInteraction000511004
      WBInteraction000511005
      WBInteraction000511006
      WBInteraction000511007
      WBInteraction000511008
      WBInteraction000511009
      WBInteraction000511010
      WBInteraction000511011
      WBInteraction000511012
      WBInteraction000511013
      WBInteraction000511014
      WBInteraction000511015
      WBInteraction000511016
      WBInteraction000511017
      WBInteraction000511018
      WBInteraction000511019
      WBInteraction000511020
      WBInteraction000511021
      WBInteraction000511022
      WBInteraction000511023
      WBInteraction000511024
      WBInteraction000511025
      WBInteraction000511026
      WBInteraction000511027
      WBInteraction000511028
      WBInteraction000511029
      WBInteraction000511030
      WBInteraction000511031
      WBInteraction000511032
      WBInteraction000511033
      WBInteraction000511034
      WBInteraction000511035
      WBInteraction000511036
      WBInteraction000511037
      WBInteraction000511038
      WBInteraction000511039
      WBInteraction000511040
      WBInteraction000511053
      WBInteraction000511054
      WBInteraction000511055
      WBInteraction000511056
      WBInteraction000511057
      WBInteraction000511058
      WBInteraction000511059
      WBInteraction000511060
      WBInteraction000511061
      WBInteraction000511062
      WBInteraction000511063
      WBInteraction000511064
      WBInteraction000511065
      WBInteraction000511066
      WBInteraction000511067
      WBInteraction000511068
      WBInteraction000511069
      WBInteraction000511070
      WBInteraction000511071
      WBInteraction000511072
      WBInteraction000511073
      WBInteraction000511074
      WBInteraction000511075
      WBInteraction000511076
      WBInteraction000511077
      WBInteraction000511078
      WBInteraction000511079
      WBInteraction000511080
      WBInteraction000511081
      WBInteraction000511082
      WBInteraction000511083
      WBInteraction000511084
      WBInteraction000511085
      WBInteraction000511086
      WBInteraction000511087
      WBInteraction000511088
      WBInteraction000517143
      WBInteraction000517144
      WBInteraction000517145
      WBInteraction000523588
      WBInteraction000523589
      WBInteraction000541635
      WBInteraction000541935
      WBInteraction000542793
      WBInteraction000548631
      WBInteraction000549813
      WBInteraction000549814
      WBInteraction000554344
      WBInteraction000554427
      WBInteraction000555368
      WBInteraction000555922
      WBInteraction000558654
      WBInteraction000558955
      WBInteraction000559455
      WBInteraction000559926
      WBInteraction000561836
      WBInteraction000562201
      WBInteraction000562364
      WBInteraction000566334
      WBInteraction000566613
      WBInteraction000567407
      WBInteraction000568223
      WBInteraction000569380
      WBInteraction000569661
      WBInteraction000572670
      WBInteraction000573990
      WBInteraction000574553
      WBInteraction000577607
      WBInteraction000579322
      WBInteraction000579365
      WBInteraction000580095
      WBInteraction000583014
      WBInteraction000585419
      WBInteraction000586396
  Map_info: Map: III Position: 0.949142 Error: 0.006732
    Positive: Positive_clone: T05G5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4195
        4435
    Pseudo_map_position
  Reference (15)
  Remark: Sequence connection from [Iino Y]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene