WormBase Tree Display for Gene: WBGene00001829

WBGene00001829 SMap: S_parent: Sequence: ZK1055
  Identity: Version: 1
    Name: CGC_name: hcp-1 Person_evidence: WBPerson537
      Sequence_name: ZK1055.1
      Molecular_name: ZK1055.1
        ZK1055.1.1
        CE18470
      Other_name: CELE_ZK1055.1 Accession_evidence: NDB BX284605
      Public_name: hcp-1
    DB_info: Database: AceView gene 5H79
        WormQTL gene WBGene00001829
        WormFlux gene WBGene00001829
        NDB locus_tag CELE_ZK1055.1
        Panther gene CAEEL|WormBase=WBGene00001829|UniProtKB=O76447
          family PTHR34491
        NCBI gene 179049
        RefSeq protein NM_072276.4
        TREEFAM TREEFAM_ID TF101133
        TrEMBL UniProtAcc O76447
        UniProt_GCRP UniProtAcc O76447
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hcp
    Allele (78)
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog (30)
    Paralog: WBGene00001830 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
    Structured_description: Concise_description: hcp-1 encodes a homolog of the mammalian centromere protein-F (CENP-F) and is involved in mitotic chromosome segregation; hcp-1 functions in an ordered pathway consisting of two other CENP proteins encoded by hcp-3 and hcp-4 to control assembly of the kinetochore; hcp-1 localization to the kinetochore is dependent on hcp-3 and hcp-4. Paper_evidence: WBPaper00003772
            WBPaper00004735
          Curator_confirmed: WBPerson324
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Involved in chromosome segregation; organelle organization; and protein localization. Located in kinetochore; nucleus; and spindle. Expressed in AB and Psub1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1055.1
    Corresponding_transcript: ZK1055.1.1
    Other_sequence (6)
    Associated_feature: WBsf661379
      WBsf231892
      WBsf231893
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr1191
      Expr3059
      Expr1014439
      Expr1031074
      Expr1162505
      Expr1200204
      Expr2012377
      Expr2030613
    Drives_construct: WBCnstr00020451
      WBCnstr00036662
    Construct_product: WBCnstr00000663
      WBCnstr00000893
      WBCnstr00017306
      WBCnstr00020451
      WBCnstr00036662
    Antibody: WBAntibody00000249
      WBAntibody00002971
    Microarray_results (18)
    Expression_cluster (196)
    Interaction: WBInteraction000028215
      WBInteraction000030835
      WBInteraction000030836
      WBInteraction000030837
      WBInteraction000030838
      WBInteraction000051998
      WBInteraction000051999
      WBInteraction000052822
      WBInteraction000136853
      WBInteraction000136854
      WBInteraction000136855
      WBInteraction000147191
      WBInteraction000171188
      WBInteraction000171834
      WBInteraction000193607
      WBInteraction000217921
      WBInteraction000218213
      WBInteraction000223116
      WBInteraction000275081
      WBInteraction000277566
      WBInteraction000281493
      WBInteraction000298528
      WBInteraction000307073
      WBInteraction000321812
      WBInteraction000343414
      WBInteraction000366701
      WBInteraction000371085
      WBInteraction000374706
      WBInteraction000384594
      WBInteraction000401123
      WBInteraction000402601
      WBInteraction000414672
      WBInteraction000427355
      WBInteraction000445187
      WBInteraction000452211
      WBInteraction000501390
      WBInteraction000501391
      WBInteraction000501682
      WBInteraction000501683
      WBInteraction000513971
      WBInteraction000513973
      WBInteraction000514512
      WBInteraction000514513
      WBInteraction000514517
      WBInteraction000522186
      WBInteraction000523553
      WBInteraction000540131
      WBInteraction000540136
      WBInteraction000540138
      WBInteraction000540141
      WBInteraction000540142
      WBInteraction000540143
      WBInteraction000540146
      WBInteraction000540531
      WBInteraction000540989
      WBInteraction000541588
      WBInteraction000541594
      WBInteraction000543531
      WBInteraction000550726
      WBInteraction000554258
      WBInteraction000555995
      WBInteraction000558219
      WBInteraction000558221
      WBInteraction000562684
      WBInteraction000564490
      WBInteraction000564588
      WBInteraction000567888
      WBInteraction000568723
      WBInteraction000577005
      WBInteraction000577137
      WBInteraction000577595
      WBInteraction000578443
  Map_info: Map: V Position: 0.10906 Error: 0.000539
    Positive: Positive_clone: ZK1055 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (31)
  Remark: Sequence connection from [Moore LL, Roth MB]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene