WormBase Tree Display for Gene: WBGene00000637
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WBGene00000637 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | C01H6 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-61 | Person_evidence | WBPerson345 | |||||
Sequence_name | C01H6.1 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_C01H6.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | col-61 | ||||||||
DB_info | Database | AceView | gene | 1H778 | |||||
WormQTL | gene | WBGene00000637 | |||||||
WormFlux | gene | WBGene00000637 | |||||||
NDB | locus_tag | CELE_C01H6.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000637|UniProtKB=Q17582 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 182090 | |||||||
RefSeq | protein | NM_059634.2 | |||||||
TREEFAM | TREEFAM_ID | TF316783 | |||||||
TrEMBL | UniProtAcc | Q17582 | |||||||
UniProt_GCRP | UniProtAcc | Q17582 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (26) | |||||||||
Strain | WBStrain00032647 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00058577 | ||||||||
00058578 | |||||||||
00058579 | |||||||||
00107638 | |||||||||
Ortholog (22) | |||||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C01H6.1 | |||||||
Corresponding_transcript | C01H6.1.1 | ||||||||
Other_sequence | MH00248 | ||||||||
TDC02402_1 | |||||||||
MH03575 | |||||||||
AM744200.1 | |||||||||
Associated_feature | WBsf664422 | ||||||||
WBsf984124 | |||||||||
WBsf984125 | |||||||||
WBsf984126 | |||||||||
WBsf1010049 | |||||||||
WBsf1010050 | |||||||||
WBsf219705 | |||||||||
Experimental_info | RNAi_result | WBRNAi00002883 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039369 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00028316 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022721 | ||||||||
Expr1143484 | |||||||||
Expr2010411 | |||||||||
Expr2028653 | |||||||||
Drives_construct | WBCnstr00037408 | ||||||||
Construct_product | WBCnstr00037408 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (149) | |||||||||
Interaction | WBInteraction000190487 | ||||||||
WBInteraction000285761 | |||||||||
WBInteraction000361510 | |||||||||
WBInteraction000413464 | |||||||||
WBInteraction000427035 | |||||||||
WBInteraction000435419 | |||||||||
WBInteraction000452145 | |||||||||
WBInteraction000454071 | |||||||||
WBInteraction000463585 | |||||||||
WBInteraction000465286 | |||||||||
WBInteraction000475033 | |||||||||
Map_info | Map | I | Position | 1.83826 | Error | 0.001422 | |||
Positive | Positive_clone | C01H6 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00064552 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |