WormBase Tree Display for Gene: WBGene00000181
expand all nodes | collapse all nodes | view schema
WBGene00000181 | SMap | S_parent | Sequence | F01G4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ard-1 | |||||||
Sequence_name | F01G4.2 | ||||||||
Molecular_name | F01G4.2a | ||||||||
F01G4.2a.1 | |||||||||
CE03127 | |||||||||
F01G4.2b | |||||||||
CE49748 | |||||||||
F01G4.2b.1 | |||||||||
Other_name | CELE_F01G4.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | ard-1 | ||||||||
DB_info | Database | AceView | gene | 4L897 | |||||
WormQTL | gene | WBGene00000181 | |||||||
WormFlux | gene | WBGene00000181 | |||||||
NDB | locus_tag | CELE_F01G4.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000181|UniProtKB=Q19102 | |||||||
family | PTHR43658 | ||||||||
NCBI | gene | 178016 | |||||||
RefSeq | protein | NM_001307064.3 | |||||||
NM_069682.8 | |||||||||
TrEMBL | UniProtAcc | Q19102 | |||||||
A0A061AD09 | |||||||||
UniProt_GCRP | UniProtAcc | Q19102 | |||||||
OMIM | gene | 300256 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ard | ||||||||
Allele (29) | |||||||||
Strain | WBStrain00049398 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000174 | ||||||||
00000175 | |||||||||
00000176 | |||||||||
00000177 | |||||||||
00000178 | |||||||||
00000179 | |||||||||
Contained_in_operon | CEOP4412 | ||||||||
Ortholog (44) | |||||||||
Paralog (38) | |||||||||
Structured_description | Concise_description | ard-1 encodes a homolog of mammalian 3-hydroxyacyl-CoA dehydrogenase (HADH II)/amyloid-beta binding alcohol dehydrogenase (ABAD) that is predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
WBPaper00012828 | |||||||||
WBPaper00013599 | |||||||||
WBPaper00013615 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable estradiol 17-beta-dehydrogenase [NAD(P)] activity. Predicted to be involved in androgen metabolic process; estrogen metabolic process; and fatty acid metabolic process. Predicted to be located in mitochondrion. Expressed in hypodermis. Human ortholog(s) of this gene implicated in Alzheimer's disease; osteosarcoma; pheochromocytoma; and syndromic X-linked intellectual disability type 10. Is an ortholog of human HSD17B10 (hydroxysteroid 17-beta dehydrogenase 10). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||
DOID:3347 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||||
DOID:0060810 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||||
DOID:0050771 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4800) | ||||||
Molecular_info | Corresponding_CDS | F01G4.2a | |||||||
F01G4.2b | |||||||||
Corresponding_transcript | F01G4.2a.1 | ||||||||
F01G4.2b.1 | |||||||||
Other_sequence (74) | |||||||||
Associated_feature | WBsf997771 | ||||||||
WBsf997772 | |||||||||
WBsf1018176 | |||||||||
WBsf229103 | |||||||||
WBsf229104 | |||||||||
Experimental_info | RNAi_result | WBRNAi00025001 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027256 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00043779 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076269 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00012757 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102583 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030558 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102692 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102683 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00102674 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr8141 | ||||||||
Expr12157 | |||||||||
Expr1024424 | |||||||||
Expr1030105 | |||||||||
Expr1147756 | |||||||||
Expr2009389 | |||||||||
Expr2027625 | |||||||||
Drives_construct | WBCnstr00013141 | ||||||||
WBCnstr00020295 | |||||||||
WBCnstr00037681 | |||||||||
Construct_product | WBCnstr00037681 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (112) | |||||||||
Interaction | WBInteraction000112600 | ||||||||
WBInteraction000122456 | |||||||||
WBInteraction000135250 | |||||||||
WBInteraction000136034 | |||||||||
WBInteraction000141197 | |||||||||
WBInteraction000143679 | |||||||||
WBInteraction000153340 | |||||||||
WBInteraction000153341 | |||||||||
WBInteraction000190881 | |||||||||
WBInteraction000193270 | |||||||||
WBInteraction000195912 | |||||||||
WBInteraction000203140 | |||||||||
WBInteraction000213159 | |||||||||
WBInteraction000235082 | |||||||||
WBInteraction000239624 | |||||||||
WBInteraction000247551 | |||||||||
WBInteraction000247974 | |||||||||
WBInteraction000251561 | |||||||||
WBInteraction000254065 | |||||||||
WBInteraction000257956 | |||||||||
WBInteraction000258189 | |||||||||
WBInteraction000260609 | |||||||||
WBInteraction000267715 | |||||||||
WBInteraction000272506 | |||||||||
WBInteraction000291039 | |||||||||
WBInteraction000314087 | |||||||||
WBInteraction000314736 | |||||||||
WBInteraction000333681 | |||||||||
WBInteraction000351790 | |||||||||
WBInteraction000356712 | |||||||||
WBInteraction000367844 | |||||||||
WBInteraction000405530 | |||||||||
WBInteraction000409553 | |||||||||
WBInteraction000420769 | |||||||||
WBInteraction000427049 | |||||||||
WBInteraction000437995 | |||||||||
WBInteraction000440886 | |||||||||
WBInteraction000442511 | |||||||||
WBInteraction000448267 | |||||||||
WBInteraction000449577 | |||||||||
WBInteraction000467492 | |||||||||
WBInteraction000469483 | |||||||||
WBInteraction000525041 | |||||||||
WBInteraction000549567 | |||||||||
WBInteraction000551680 | |||||||||
WBInteraction000552291 | |||||||||
WBInteraction000552601 | |||||||||
WBInteraction000553679 | |||||||||
WBInteraction000554571 | |||||||||
WBInteraction000555127 | |||||||||
WBInteraction000559172 | |||||||||
WBInteraction000561482 | |||||||||
WBInteraction000562111 | |||||||||
WBInteraction000566177 | |||||||||
WBInteraction000570347 | |||||||||
WBInteraction000576197 | |||||||||
WBInteraction000577480 | |||||||||
WBInteraction000579547 | |||||||||
WBInteraction000579857 | |||||||||
WBInteraction000585975 | |||||||||
Map_info | Map | IV | Position | 4.90778 | |||||
Positive | Positive_clone | F01G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | The name sad was previously used for this Short-chain Alcohol Dehydrogenase ERAB family by Carl Johnson. | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |