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WormBase Tree Display for Gene: WBGene00009353

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Name Class

WBGene00009353SMapS_parentSequenceF33A8
IdentityVersion2
NameCGC_namesdhd-1Person_evidenceWBPerson205
Sequence_nameF33A8.5
Molecular_nameF33A8.5
F33A8.5.1
CE17757
Other_nameCELE_F33A8.5Accession_evidenceNDBBX284602
Public_namesdhd-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
219 Jul 2006 13:38:53WBPerson2970Name_changeCGC_namesdhd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsdhd
Allele (20)
StrainWBStrain00002911
WBStrain00033449
WBStrain00033443
WBStrain00033437
WBStrain00033457
WBStrain00033460
WBStrain00033463
WBStrain00051083
RNASeq_FPKM (74)
GO_annotation (22)
Contained_in_operonCEOP2512
Ortholog (38)
Structured_descriptionConcise_descriptionF33A8.5 is orthologous to the human gene SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT D, INTEGRAL MEMBRANE PROTEIN (SDHD; OMIM:602690), which when mutated leads to disease.Curator_confirmed (2)
Date_last_updated06 Aug 2004 00:00:00
Automated_descriptionContributes to succinate dehydrogenase (ubiquinone) activity. Predicted to be involved in mitochondrial electron transport, succinate to ubiquinone and tricarboxylic acid cycle. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone). Human ortholog(s) of this gene implicated in Carney-Stratakis syndrome; mitochondrial complex II deficiency; and paraganglioma. Is an ortholog of human SDHD (succinate dehydrogenase complex subunit D).Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060537Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10683)
DOID:0080533Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10683)
DOID:0050773Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10683)
Molecular_infoCorresponding_CDSF33A8.5
Corresponding_transcriptF33A8.5.1
Other_sequence (60)
Associated_featureWBsf650542
WBsf223882
WBsf223883
Experimental_infoRNAi_resultWBRNAi00111200Inferred_automaticallyRNAi_primary
WBRNAi00111197Inferred_automaticallyRNAi_primary
WBRNAi00112787Inferred_automaticallyRNAi_primary
WBRNAi00093550Inferred_automaticallyRNAi_primary
WBRNAi00112907Inferred_automaticallyRNAi_primary
WBRNAi00111194Inferred_automaticallyRNAi_primary
WBRNAi00111206Inferred_automaticallyRNAi_primary
WBRNAi00025370Inferred_automaticallyRNAi_primary
WBRNAi00046181Inferred_automaticallyRNAi_primary
WBRNAi00008742Inferred_automaticallyRNAi_primary
WBRNAi00106228Inferred_automaticallyRNAi_primary
WBRNAi00111219Inferred_automaticallyRNAi_primary
WBRNAi00111214Inferred_automaticallyRNAi_primary
WBRNAi00031707Inferred_automaticallyRNAi_primary
WBRNAi00112847Inferred_automaticallyRNAi_primary
WBRNAi00022950Inferred_automaticallyRNAi_primary
Expr_patternChronogram1799
Expr5940
Expr1013665
Expr1034092
Expr1150069
Expr2015665
Expr2033898
Drives_constructWBCnstr00003424
WBCnstr00032261
Construct_productWBCnstr00032261
Microarray_results (20)
Expression_cluster (99)
InteractionWBInteraction000035656
WBInteraction000035657
WBInteraction000041338
WBInteraction000043081
WBInteraction000044244
WBInteraction000046163
WBInteraction000106323
WBInteraction000131365
WBInteraction000131924
WBInteraction000132075
WBInteraction000141307
WBInteraction000143042
WBInteraction000153608
WBInteraction000153657
WBInteraction000155199
WBInteraction000155484
WBInteraction000155485
WBInteraction000155486
WBInteraction000155487
WBInteraction000155488
WBInteraction000155489
WBInteraction000155490
WBInteraction000155491
WBInteraction000155492
WBInteraction000155493
WBInteraction000155494
WBInteraction000155495
WBInteraction000155496
WBInteraction000155497
WBInteraction000155498
WBInteraction000155829
WBInteraction000156124
WBInteraction000156149
WBInteraction000156210
WBInteraction000186092
WBInteraction000192293
WBInteraction000212213
WBInteraction000232473
WBInteraction000233956
WBInteraction000234180
WBInteraction000235121
WBInteraction000236145
WBInteraction000238630
WBInteraction000239800
WBInteraction000244613
WBInteraction000244623
WBInteraction000244740
WBInteraction000246910
WBInteraction000248625
WBInteraction000249330
WBInteraction000268780
WBInteraction000296242
WBInteraction000319404
WBInteraction000329688
WBInteraction000330449
WBInteraction000331386
WBInteraction000342016
WBInteraction000349282
WBInteraction000355562
WBInteraction000360300
WBInteraction000362088
WBInteraction000364485
WBInteraction000377021
WBInteraction000378541
WBInteraction000380449
WBInteraction000393730
WBInteraction000400636
WBInteraction000407768
WBInteraction000426772
WBInteraction000428911
WBInteraction000430471
WBInteraction000435692
WBInteraction000436600
WBInteraction000442567
WBInteraction000447566
WBInteraction000449098
WBInteraction000474004
WBInteraction000520666
WBInteraction000536307
WBInteraction000536312
WBInteraction000536317
WBInteraction000547973
WBInteraction000551821
Map_infoMapIIPosition3.16067Error0.001283
PositivePositive_cloneF33A8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025130
WBPaper00031194
WBPaper00038491
WBPaper00040490
WBPaper00047026
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene