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WormBase Tree Display for Gene: WBGene00018950

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Name Class

WBGene00018950SMapS_parentSequenceF56C9
IdentityVersion1
NameSequence_nameF56C9.6
Molecular_nameF56C9.6a
F56C9.6a.1
CE01325
F56C9.6b
CE41663
F56C9.6c
CE41664
F56C9.6b.1
F56C9.6c.1
Other_nameCELE_F56C9.6Accession_evidenceNDBBX284603
Public_nameF56C9.6
DB_infoDatabaseAceViewgene3I398
WormQTLgeneWBGene00018950
WormFluxgeneWBGene00018950
NDBlocus_tagCELE_F56C9.6
NCBIgene176035
RefSeqproteinNM_001129231.4
NM_001129232.4
NM_066209.6
TrEMBLUniProtAccH2KY87
A8WFF4
H2KY89
UniProt_GCRPUniProtAccH2KY89
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (30)
RNASeq_FPKM (74)
OrthologWBGene00023978Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00035651Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00066423Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00135876Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP26.g21688Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10348Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15374Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1300Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1200Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g4646Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1357Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-F56C9.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7216Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_03489.g30358Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_008705Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30034700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8134Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in M cell; germ line; germline precursor cell; head mesodermal cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; proteomic; and RNA-seq studies. Is affected by eleven chemicals including rotenone; bisphenol S; and Zidovudine based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF56C9.6a
F56C9.6b
F56C9.6c
Corresponding_CDS_historyF56C9.6:wp183
Corresponding_transcriptF56C9.6a.1
F56C9.6b.1
F56C9.6c.1
Other_sequenceCGC00745_1
CGC00817_1
CR00742
CRC11816_1
CRC02019_1
CJC03110_1
CRC02987_1
Associated_featureWBsf651193
WBsf651194
WBsf992981
WBsf992982
WBsf226955
WBsf226956
Experimental_infoRNAi_resultWBRNAi00032949Inferred_automaticallyRNAi_primary
WBRNAi00015803Inferred_automaticallyRNAi_primary
WBRNAi00048677Inferred_automaticallyRNAi_primary
WBRNAi00015802Inferred_automaticallyRNAi_primary
WBRNAi00005394Inferred_automaticallyRNAi_primary
Expr_patternExpr1015761
Expr1038173
Expr1152436
Expr2004287
Expr2022511
Drives_constructWBCnstr00026170
Construct_productWBCnstr00026170
Microarray_results (20)
Expression_cluster (155)
InteractionWBInteraction000104004
WBInteraction000106299
WBInteraction000106362
WBInteraction000111940
WBInteraction000113621
WBInteraction000118884
WBInteraction000125887
WBInteraction000133246
WBInteraction000133586
WBInteraction000134708
WBInteraction000135296
WBInteraction000135866
WBInteraction000136401
WBInteraction000141054
WBInteraction000141490
WBInteraction000141547
WBInteraction000141884
WBInteraction000145729
WBInteraction000145981
WBInteraction000147404
WBInteraction000148826
WBInteraction000149092
WBInteraction000152645
WBInteraction000156992
WBInteraction000157016
WBInteraction000161136
WBInteraction000162787
WBInteraction000163841
WBInteraction000164619
WBInteraction000164839
WBInteraction000165048
WBInteraction000166545
WBInteraction000167915
WBInteraction000171119
WBInteraction000171490
WBInteraction000171830
WBInteraction000175313
WBInteraction000175382
WBInteraction000175847
WBInteraction000176560
WBInteraction000176671
WBInteraction000178899
WBInteraction000179267
WBInteraction000179329
WBInteraction000180172
WBInteraction000181287
WBInteraction000181342
WBInteraction000181519
WBInteraction000181690
WBInteraction000181774
WBInteraction000184523
WBInteraction000184703
WBInteraction000184941
WBInteraction000186389
WBInteraction000186395
WBInteraction000188058
WBInteraction000188388
WBInteraction000188671
WBInteraction000189309
WBInteraction000189435
WBInteraction000189679
WBInteraction000190250
WBInteraction000190546
WBInteraction000191164
WBInteraction000194130
WBInteraction000195767
WBInteraction000196747
WBInteraction000198469
WBInteraction000198663
WBInteraction000199885
WBInteraction000200754
WBInteraction000201733
WBInteraction000202241
WBInteraction000203009
WBInteraction000203548
WBInteraction000205004
WBInteraction000205966
WBInteraction000206062
WBInteraction000206154
WBInteraction000206853
WBInteraction000206949
WBInteraction000207947
WBInteraction000208091
WBInteraction000208346
WBInteraction000208495
WBInteraction000209391
WBInteraction000209798
WBInteraction000210909
WBInteraction000211501
WBInteraction000211750
WBInteraction000212739
WBInteraction000212809
WBInteraction000213360
WBInteraction000214880
WBInteraction000214985
WBInteraction000216734
WBInteraction000216768
WBInteraction000216874
WBInteraction000218382
WBInteraction000218421
WBInteraction000218886
WBInteraction000219149
WBInteraction000219273
WBInteraction000221093
WBInteraction000221374
WBInteraction000222170
WBInteraction000222269
WBInteraction000222336
WBInteraction000222929
WBInteraction000223528
WBInteraction000223605
WBInteraction000224006
WBInteraction000226747
WBInteraction000227746
WBInteraction000231780
WBInteraction000232058
WBInteraction000232512
WBInteraction000232681
WBInteraction000233049
WBInteraction000235127
WBInteraction000237565
WBInteraction000239389
WBInteraction000239481
WBInteraction000240617
WBInteraction000241161
WBInteraction000241617
WBInteraction000242744
WBInteraction000242897
WBInteraction000245443
WBInteraction000246436
WBInteraction000247944
WBInteraction000248312
WBInteraction000248453
WBInteraction000248728
WBInteraction000250602
WBInteraction000251364
WBInteraction000252432
WBInteraction000252498
WBInteraction000253001
WBInteraction000253600
WBInteraction000257680
WBInteraction000259158
WBInteraction000260821
WBInteraction000261020
WBInteraction000262288
WBInteraction000262873
WBInteraction000263630
WBInteraction000264154
WBInteraction000264651
WBInteraction000265544
WBInteraction000266274
WBInteraction000267135
WBInteraction000269546
WBInteraction000269724
WBInteraction000270346
WBInteraction000271396
WBInteraction000271519
WBInteraction000271775
WBInteraction000273366
WBInteraction000273639
WBInteraction000274155
WBInteraction000275588
WBInteraction000276801
WBInteraction000277576
WBInteraction000279499
WBInteraction000279624
WBInteraction000279839
WBInteraction000281142
WBInteraction000281144
WBInteraction000282109
WBInteraction000282594
WBInteraction000283218
WBInteraction000284239
WBInteraction000285790
WBInteraction000286399
WBInteraction000286439
WBInteraction000286723
WBInteraction000289456
WBInteraction000290230
WBInteraction000290253
WBInteraction000291336
WBInteraction000291493
WBInteraction000291802
WBInteraction000291873
WBInteraction000292267
WBInteraction000293001
WBInteraction000293809
WBInteraction000295104
WBInteraction000295281
WBInteraction000296391
WBInteraction000296800
WBInteraction000299305
WBInteraction000299442
WBInteraction000300556
WBInteraction000300884
WBInteraction000301042
WBInteraction000301151
WBInteraction000304014
WBInteraction000306169
WBInteraction000306951
WBInteraction000307090
WBInteraction000307805
WBInteraction000307882
WBInteraction000308079
WBInteraction000309307
WBInteraction000309686
WBInteraction000311679
WBInteraction000312810
WBInteraction000316043
WBInteraction000318514
WBInteraction000321915
WBInteraction000322428
WBInteraction000324737
WBInteraction000326630
WBInteraction000327221
WBInteraction000330140
WBInteraction000331958
WBInteraction000333613
WBInteraction000334860
WBInteraction000335771
WBInteraction000340195
WBInteraction000341579
WBInteraction000341970
WBInteraction000342220
WBInteraction000342567
WBInteraction000347202
WBInteraction000347205
WBInteraction000347319
WBInteraction000348976
WBInteraction000351685
WBInteraction000352880
WBInteraction000353231
WBInteraction000353346
WBInteraction000355324
WBInteraction000355436
WBInteraction000357074
WBInteraction000363357
WBInteraction000367351
WBInteraction000370707
WBInteraction000372958
WBInteraction000373405
WBInteraction000373828
WBInteraction000373898
WBInteraction000374501
WBInteraction000377700
WBInteraction000378020
WBInteraction000379893
WBInteraction000379910
WBInteraction000381840
WBInteraction000385166
WBInteraction000391689
WBInteraction000392223
WBInteraction000392576
WBInteraction000394392
WBInteraction000395314
WBInteraction000400957
WBInteraction000402221
WBInteraction000402279
WBInteraction000402312
WBInteraction000402441
WBInteraction000403175
WBInteraction000406760
WBInteraction000407727
WBInteraction000412422
WBInteraction000414761
WBInteraction000415733
WBInteraction000415999
WBInteraction000420516
WBInteraction000422351
WBInteraction000422410
WBInteraction000422587
WBInteraction000423510
WBInteraction000423527
WBInteraction000425319
WBInteraction000425341
WBInteraction000428927
WBInteraction000433521
WBInteraction000433589
WBInteraction000435264
WBInteraction000435326
WBInteraction000437603
WBInteraction000438526
WBInteraction000439382
WBInteraction000440072
WBInteraction000440522
WBInteraction000442660
WBInteraction000443001
WBInteraction000443216
WBInteraction000447488
WBInteraction000447976
WBInteraction000448707
WBInteraction000449792
WBInteraction000452983
WBInteraction000453457
WBInteraction000456114
WBInteraction000456607
WBInteraction000456945
WBInteraction000460191
WBInteraction000461103
WBInteraction000462435
WBInteraction000568009
WBInteraction000575533
WBInteraction000577121
Map_infoPositivePositive_cloneF56C9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII-0.754081
MethodGene