WormBase Tree Display for Gene: WBGene00018762

WBGene00018762 SMap: S_parent: Sequence: F53E10
  Identity: Version: 1
    Name: Sequence_name: F53E10.6
      Molecular_name: F53E10.6
        F53E10.6.1
        CE10930
      Other_name: CELE_F53E10.6 Accession_evidence: NDB BX284605
      Public_name: F53E10.6
    DB_info: Database: AceView gene 5D80
        WormQTL gene WBGene00018762
        WormFlux gene WBGene00018762
        NDB locus_tag CELE_F53E10.6
        Panther gene CAEEL|WormBase=WBGene00018762|UniProtKB=P91318
          family PTHR13245
        NCBI gene 178728
        RefSeq protein NM_071312.4
        SwissProt UniProtAcc P91318
        TREEFAM TREEFAM_ID TF106119
        UniProt_GCRP UniProtAcc P91318
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (48)
    RNASeq_FPKM (74)
    GO_annotation: 00050597
      00050598
      00050599
      00123790
    Ortholog: WBGene00028866 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062108 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00152255 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121475 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00230764 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g993 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12033 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19872 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15564 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10275 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10609 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17979 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21852 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10290 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g14997 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1868 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00169.g6105 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F53E10.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13927 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00848.g16065 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15236 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_019077 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50050800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g13504 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244206 Onchocerca volvulus From_analysis: WormBase-Compara
      SGD:S000006347 Saccharomyces cerevisiae From_analysis: OrthoFinder
            Panther
      FB:FBgn0038275 Drosophila melanogaster From_analysis: OrthoFinder
            Panther
      ZFIN:ZDB-GENE-030131-5261 Danio rerio From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      HGNC:24255 Homo sapiens From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
      MGI:1914473 Mus musculus From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1306106 Rattus norvegicus From_analysis: Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description: Automated_description: Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to be part of preribosome, large subunit precursor. Expressed in several structures, including body wall musculature and gonad. Is an ortholog of human RRP15 (ribosomal RNA processing 15 homolog). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F53E10.6
    Corresponding_transcript: F53E10.6.1
    Other_sequence: CRC04728_1
      CR08627
      Acan_isotig14017
      CJC15923_1
      CR08626
    Associated_feature: WBsf652508
      WBsf999514
      WBsf999515
      WBsf999516
      WBsf999517
      WBsf1019300
      WBsf1019301
      WBsf233422
  Experimental_info: RNAi_result: WBRNAi00075880 Inferred_automatically: RNAi_primary
      WBRNAi00008834 Inferred_automatically: RNAi_primary
      WBRNAi00061681 Inferred_automatically: RNAi_primary
      WBRNAi00048125 Inferred_automatically: RNAi_primary
      WBRNAi00025587 Inferred_automatically: RNAi_primary
      WBRNAi00033509 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13601
      Expr1029028
      Expr1038083
      Expr1151934
      Expr2004061
      Expr2022285
    Drives_construct: WBCnstr00026287
    Construct_product: WBCnstr00026287
    Microarray_results (18)
    Expression_cluster (119)
    Interaction: WBInteraction000042860
      WBInteraction000141303
      WBInteraction000147006
      WBInteraction000184072
      WBInteraction000185448
      WBInteraction000190242
      WBInteraction000194167
      WBInteraction000199839
      WBInteraction000213860
      WBInteraction000228557
      WBInteraction000256181
      WBInteraction000270711
      WBInteraction000294230
      WBInteraction000304649
      WBInteraction000313492
      WBInteraction000335038
      WBInteraction000355383
      WBInteraction000366516
      WBInteraction000371018
      WBInteraction000376584
      WBInteraction000381911
      WBInteraction000385094
      WBInteraction000405110
      WBInteraction000410692
      WBInteraction000411387
      WBInteraction000418795
      WBInteraction000422987
      WBInteraction000425044
      WBInteraction000548259
      WBInteraction000549785
      WBInteraction000555340
      WBInteraction000576651
  Map_info: Positive: Positive_clone: F53E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -13.7328
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00060275
  Method: Gene