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WormBase Tree Display for Gene: WBGene00017098

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Name Class

WBGene00017098SMapS_parentSequenceE02D9
IdentityVersion4
NameSequence_nameE02D9.1
Molecular_nameE02D9.1
E02D9.1.1
CE08610
Other_nameC37A2.aCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_E02D9.1Accession_evidenceNDBBX284601
Public_nameE02D9.1
DB_infoDatabaseAceViewgene1H379C
1H379
WormQTLgeneWBGene00017098
SignaLinkproteinWBGene00017098
WormFluxgeneWBGene00017098
NDBlocus_tagCELE_E02D9.1
PanthergeneCAEEL|WormBase=WBGene00017098|UniProtKB=Q9TYV7
familyPTHR11208
NCBIgene41656986
RefSeqproteinNM_001383284.2
TrEMBLUniProtAccQ8MXD9
UniProt_GCRPUniProtAccQ8MXD9
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 May 2019 14:10:26WBPerson1983Name_changeCGC_namemek-5
320 May 2019 15:02:24WBPerson1983EventSplit_intoWBGene00304811
425 Apr 2022 14:55:37WBPerson1983Name_changeCGC_name
Split_intoWBGene00304811
StatusLive
Gene_infoBiotypeSO:0001217
Allele (32)
StrainWBStrain00002999
WBStrain00002438
WBStrain00002471
RNASeq_FPKM (74)
GO_annotation00122571
00122572
OrthologWBGene00056194Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00033664Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WBGene00143308Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00056195Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00113223Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00141451Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00106057Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00144348Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00270373Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223354Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10637Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10289Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8825Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g16711Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16934Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g4201Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6902Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3363Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g24296Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5938Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00292.g8623Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_I.g2591Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold539.g3347Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00145.g5562Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_24287Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001874Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11980Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g3027Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10342000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1246Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00133609Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237692Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00263133Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00292915Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00001595Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00006423Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010046Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013325Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013808Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022101Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044674Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019509Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00304811Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Expressed in head and tail.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE02D9.1
Corresponding_CDS_historyE02D9.1a:wp271
E02D9.1c:wp121
E02D9.1c:wp143
E02D9.1c:wp271
E02D9.1d:wp121
E02D9.1d:wp271
Corresponding_transcriptE02D9.1.1
Other_sequence (33)
Associated_featureWBsf643401
WBsf654757
WBsf217892
WBsf217893
WBsf217894
WBsf217895
WBsf217896
Experimental_infoRNAi_resultWBRNAi00003109Inferred_automaticallyRNAi_primary
WBRNAi00043596Inferred_automaticallyRNAi_primary
WBRNAi00007944Inferred_automaticallyRNAi_primary
WBRNAi00029624Inferred_automaticallyRNAi_primary
WBRNAi00024760Inferred_automaticallyRNAi_primary
WBRNAi00024761Inferred_automaticallyRNAi_primary
Expr_patternExpr5642
Expr5643
Expr5644
Expr1024821
Expr1037348
Expr1147586
Expr2002130
Expr2020353
Drives_constructWBCnstr00003043
WBCnstr00003063
WBCnstr00004519
WBCnstr00027568
Construct_productWBCnstr00027568
Microarray_results (18)
Expression_cluster (131)
InteractionWBInteraction000032381
WBInteraction000178946
WBInteraction000195353
WBInteraction000195354
WBInteraction000202286
WBInteraction000215565
WBInteraction000253141
WBInteraction000272845
WBInteraction000279990
WBInteraction000305354
WBInteraction000306677
WBInteraction000339214
WBInteraction000345436
WBInteraction000362542
WBInteraction000375591
WBInteraction000414639
WBInteraction000447513
WBInteraction000464322
WBInteraction000470183
WBInteraction000471326
WBInteraction000471327
WBInteraction000521057
WBInteraction000546092
WBInteraction000548219
WBInteraction000550321
WBInteraction000552429
WBInteraction000552757
WBInteraction000554146
WBInteraction000559167
WBInteraction000563785
WBInteraction000568232
WBInteraction000570129
WBInteraction000580992
WBInteraction000583412
WBInteraction000584649
Map_infoMapIPosition1.32415
PositivePositive_cloneE02D9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027258
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
mek-5 CGC name removed and added to the other half of the original gene as it was incorrectly retained on E02D9.1 and not transferred to E02D9.3
MethodGene