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WormBase Tree Display for Gene: WBGene00012205

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Name Class

WBGene00012205SMapS_parentSequenceW02B12
IdentityVersion2
NameCGC_namemetl-1Person_evidenceWBPerson11446
Sequence_nameW02B12.10
Molecular_nameW02B12.10
W02B12.10.1
CE03770
Other_nameCELE_W02B12.10Accession_evidenceNDBBX284602
Public_namemetl-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
206 Feb 2019 16:53:24WBPerson1983Name_changeCGC_namemetl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmetl
Allele (26)
RNASeq_FPKM (74)
GO_annotation (25)
Contained_in_operonCEOP2540
OrthologWBGene00025851Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00053576Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00162916Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00127219Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00111892Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00140279Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00226388Brugia malayiFrom_analysisWormBase-Compara
CSP21.g1690Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3733Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15698Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g12423Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g1931Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g13096Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5131Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12874Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4656Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17803Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_03548.g18176Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-W02B12.10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold554.g3707Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02822.g28033Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14178Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005339Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02053Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6176Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20329310Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5954Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247671Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257690Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291663Trichuris murisFrom_analysisWormBase-Compara
SGD:S000002360Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0025629Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-041010-24Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:7030Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1339986Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1593036Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionAutomated_descriptionPredicted to enable tRNA (guanine-N7-)-methyltransferase activity. Predicted to be involved in RNA (guanine-N7)-methylation and tRNA methylation. Predicted to be located in nucleus. Predicted to be part of tRNA methyltransferase complex. Is an ortholog of human METTL1 (methyltransferase 1, tRNA methylguanosine).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW02B12.10
Corresponding_transcriptW02B12.10.1
Other_sequence (39)
Associated_featureWBsf666142
WBsf223943
Experimental_infoRNAi_resultWBRNAi00061646Inferred_automaticallyRNAi_primary
WBRNAi00054552Inferred_automaticallyRNAi_primary
WBRNAi00001203Inferred_automaticallyRNAi_primary
WBRNAi00019484Inferred_automaticallyRNAi_primary
WBRNAi00036170Inferred_automaticallyRNAi_primary
WBRNAi00075894Inferred_automaticallyRNAi_primary
Expr_patternChronogram1130
Expr6817
Expr1020660
Expr1035401
Expr1158098
Expr2006677
Expr2024894
Drives_constructWBCnstr00003466
WBCnstr00030069
Construct_productWBCnstr00030069
Microarray_results (19)
Expression_cluster (134)
InteractionWBInteraction000124413
WBInteraction000126911
WBInteraction000134629
WBInteraction000138753
WBInteraction000140120
WBInteraction000140803
WBInteraction000145615
WBInteraction000146560
WBInteraction000157634
WBInteraction000157698
WBInteraction000160213
WBInteraction000160214
WBInteraction000163264
WBInteraction000164473
WBInteraction000170437
WBInteraction000171049
WBInteraction000172221
WBInteraction000179079
WBInteraction000181568
WBInteraction000185784
WBInteraction000187547
WBInteraction000191292
WBInteraction000194271
WBInteraction000194728
WBInteraction000194736
WBInteraction000195672
WBInteraction000195848
WBInteraction000199190
WBInteraction000199752
WBInteraction000205143
WBInteraction000208454
WBInteraction000209452
WBInteraction000210815
WBInteraction000210991
WBInteraction000212594
WBInteraction000213618
WBInteraction000220392
WBInteraction000228675
WBInteraction000230804
WBInteraction000236125
WBInteraction000243015
WBInteraction000247156
WBInteraction000247630
WBInteraction000251675
WBInteraction000254067
WBInteraction000254068
WBInteraction000254820
WBInteraction000260192
WBInteraction000264071
WBInteraction000269310
WBInteraction000270300
WBInteraction000270763
WBInteraction000271063
WBInteraction000273247
WBInteraction000273248
WBInteraction000273249
WBInteraction000274697
WBInteraction000275198
WBInteraction000281470
WBInteraction000292371
WBInteraction000297038
WBInteraction000297206
WBInteraction000306300
WBInteraction000306999
WBInteraction000316582
WBInteraction000318422
WBInteraction000318423
WBInteraction000334473
WBInteraction000344997
WBInteraction000346120
WBInteraction000355319
WBInteraction000359069
WBInteraction000359948
WBInteraction000363408
WBInteraction000366076
WBInteraction000367463
WBInteraction000371209
WBInteraction000373425
WBInteraction000373730
WBInteraction000380585
WBInteraction000381174
WBInteraction000381828
WBInteraction000385338
WBInteraction000386470
WBInteraction000387495
WBInteraction000391402
WBInteraction000391510
WBInteraction000394017
WBInteraction000396429
WBInteraction000396583
WBInteraction000397962
WBInteraction000402978
WBInteraction000403518
WBInteraction000404324
WBInteraction000404587
WBInteraction000405209
WBInteraction000406497
WBInteraction000408402
WBInteraction000411314
WBInteraction000411596
WBInteraction000414670
WBInteraction000415729
WBInteraction000419113
WBInteraction000421239
WBInteraction000428177
WBInteraction000428302
WBInteraction000429225
WBInteraction000429864
WBInteraction000431200
WBInteraction000437841
WBInteraction000438917
WBInteraction000439043
WBInteraction000439285
WBInteraction000448465
WBInteraction000449141
WBInteraction000453121
WBInteraction000457572
WBInteraction000461412
WBInteraction000461619
WBInteraction000462759
WBInteraction000462919
WBInteraction000463040
WBInteraction000463256
WBInteraction000464015
WBInteraction000464438
WBInteraction000464782
WBInteraction000464834
WBInteraction000465031
WBInteraction000465235
WBInteraction000465520
WBInteraction000466260
WBInteraction000466390
WBInteraction000466393
WBInteraction000467043
WBInteraction000467173
WBInteraction000467821
WBInteraction000468045
WBInteraction000468826
WBInteraction000468979
WBInteraction000469017
WBInteraction000469078
WBInteraction000469183
WBInteraction000469335
WBInteraction000469758
WBInteraction000470180
WBInteraction000470811
WBInteraction000471165
WBInteraction000471842
WBInteraction000473110
WBInteraction000473289
WBInteraction000473540
WBInteraction000473814
WBInteraction000474605
WBInteraction000475035
WBInteraction000475074
WBInteraction000475300
WBInteraction000564406
WBInteraction000573737
Map_infoMapIIPosition3.49508
PositivePositive_cloneW02B12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00059765
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene