WormBase Tree Display for Gene: WBGene00011730

WBGene00011730 SMap: S_parent: Sequence: T12D8
  Identity: Version: 2
    Name: CGC_name: drr-2 Person_evidence: WBPerson1157
      Sequence_name: T12D8.2
      Molecular_name: T12D8.2
        T12D8.2.1
        CE16399
      Other_name: CELE_T12D8.2 Accession_evidence: NDB BX284603
      Public_name: drr-2
    DB_info: Database: AceView gene 3O734
        WormQTL gene WBGene00011730
        WormFlux gene WBGene00011730
        NDB locus_tag CELE_T12D8.2
        NCBI gene 259546
        RefSeq protein NM_067417.4
        TREEFAM TREEFAM_ID TF354331
        TrEMBL UniProtAcc O45781
        UniProt_GCRP UniProtAcc O45781
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 31 Aug 2005 14:07:05 WBPerson2970 Name_change: CGC_name: drr-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: drr
    Allele (33)
    Strain: WBStrain00036332
    RNASeq_FPKM (74)
    GO_annotation: 00035206
      00035207
      00035208
      00035209
      00035210
      00035211
      00035212
      00035213
      00118967
      00118968
    Contained_in_operon: CEOP3818
    Ortholog: WBGene00055886 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00037697 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00138999 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00098656 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055967 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00162565 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00055974 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00153860 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00121127 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00226003 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5379 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g1711 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13689 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3612 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21077 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4883 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21551 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5461 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13219 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00250.g7882 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-drr-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7226 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00269.g8360 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18180 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010340 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04004 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13260 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30104600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g9399 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244770 Onchocerca volvulus From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-010328-19 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
      HGNC:12741 Homo sapiens From_analysis: Hieranoid
            OrthoFinder
      MGI:1341822 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
      RGD:1359222 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
    Paralog: WBGene00008688 Caenorhabditis elegans From_analysis: Panther
      WBGene00011155 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00011156 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00019157 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Part of polysome. Expressed in several structures, including coelomocyte; excretory canal; neurons; ventral nerve cord; and vulva. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome. Is an ortholog of human EIF4H (eukaryotic translation initiation factor 4H). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:1928 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12741)
  Molecular_info: Corresponding_CDS: T12D8.2
    Corresponding_transcript: T12D8.2.1
    Other_sequence (13)
    Associated_feature: WBsf651589
      WBsf981653
      WBsf227782
      WBsf227783
      WBsf227784
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr9027
      Expr1019228
      Expr1035156
      Expr1156792
      Expr2011096
      Expr2029332
    Drives_construct: WBCnstr00007956
      WBCnstr00007958
      WBCnstr00007959
      WBCnstr00013681
      WBCnstr00030434
    Construct_product: WBCnstr00007956
      WBCnstr00007958
      WBCnstr00007959
      WBCnstr00013681
      WBCnstr00030434
    Microarray_results (21)
    Expression_cluster (104)
    Interaction: WBInteraction000005634
      WBInteraction000030017
      WBInteraction000107443
      WBInteraction000108703
      WBInteraction000122838
      WBInteraction000128058
      WBInteraction000128084
      WBInteraction000128120
      WBInteraction000128153
      WBInteraction000128186
      WBInteraction000128220
      WBInteraction000128485
      WBInteraction000128503
      WBInteraction000128525
      WBInteraction000129112
      WBInteraction000129484
      WBInteraction000129508
      WBInteraction000129535
      WBInteraction000129565
      WBInteraction000129585
      WBInteraction000129610
      WBInteraction000129635
      WBInteraction000129667
      WBInteraction000129685
      WBInteraction000129712
      WBInteraction000129748
      WBInteraction000129771
      WBInteraction000129793
      WBInteraction000129807
      WBInteraction000129818
      WBInteraction000129834
      WBInteraction000129877
      WBInteraction000129896
      WBInteraction000129920
      WBInteraction000129936
      WBInteraction000129955
      WBInteraction000129975
      WBInteraction000130006
      WBInteraction000130060
      WBInteraction000130116
      WBInteraction000130630
      WBInteraction000131540
      WBInteraction000131598
      WBInteraction000131599
      WBInteraction000131600
      WBInteraction000131601
      WBInteraction000131602
      WBInteraction000131603
      WBInteraction000131604
      WBInteraction000131605
      WBInteraction000131606
      WBInteraction000131607
      WBInteraction000131608
      WBInteraction000131609
      WBInteraction000132664
      WBInteraction000140596
      WBInteraction000152963
      WBInteraction000154368
      WBInteraction000154449
      WBInteraction000154474
      WBInteraction000154490
      WBInteraction000154508
      WBInteraction000154522
      WBInteraction000154531
      WBInteraction000154543
      WBInteraction000154556
      WBInteraction000154569
      WBInteraction000154590
      WBInteraction000154602
      WBInteraction000154617
      WBInteraction000154629
      WBInteraction000154651
      WBInteraction000154667
      WBInteraction000154685
      WBInteraction000154703
      WBInteraction000154723
      WBInteraction000154740
      WBInteraction000154753
      WBInteraction000154764
      WBInteraction000154776
      WBInteraction000154792
      WBInteraction000154801
      WBInteraction000154818
      WBInteraction000154849
      WBInteraction000154864
      WBInteraction000154877
      WBInteraction000154893
      WBInteraction000154911
      WBInteraction000154929
      WBInteraction000154948
      WBInteraction000155364
      WBInteraction000155711
      WBInteraction000155712
      WBInteraction000155713
      WBInteraction000155714
      WBInteraction000155715
      WBInteraction000155716
      WBInteraction000155717
      WBInteraction000155718
      WBInteraction000155719
      WBInteraction000155720
      WBInteraction000155721
      WBInteraction000155722
      WBInteraction000155723
      WBInteraction000155724
      WBInteraction000155725
      WBInteraction000155726
      WBInteraction000155727
      WBInteraction000156054
      WBInteraction000178898
      WBInteraction000196869
      WBInteraction000199945
      WBInteraction000218504
      WBInteraction000221382
      WBInteraction000222643
      WBInteraction000230860
      WBInteraction000237410
      WBInteraction000248106
      WBInteraction000248225
      WBInteraction000258556
      WBInteraction000263904
      WBInteraction000267307
      WBInteraction000289254
      WBInteraction000290932
      WBInteraction000291859
      WBInteraction000291917
      WBInteraction000293887
      WBInteraction000299271
      WBInteraction000300202
      WBInteraction000304926
      WBInteraction000309326
      WBInteraction000309580
      WBInteraction000309676
      WBInteraction000312726
      WBInteraction000321280
      WBInteraction000325873
      WBInteraction000327697
      WBInteraction000328830
      WBInteraction000329814
      WBInteraction000342319
      WBInteraction000344484
      WBInteraction000360122
      WBInteraction000370441
      WBInteraction000377498
      WBInteraction000377969
      WBInteraction000378265
      WBInteraction000380134
      WBInteraction000394910
      WBInteraction000395195
      WBInteraction000398487
      WBInteraction000398579
      WBInteraction000402958
      WBInteraction000406954
      WBInteraction000407056
      WBInteraction000407806
      WBInteraction000422380
      WBInteraction000426590
      WBInteraction000431697
      WBInteraction000435205
      WBInteraction000440319
      WBInteraction000440926
      WBInteraction000442703
      WBInteraction000446159
      WBInteraction000448888
      WBInteraction000450900
      WBInteraction000451780
      WBInteraction000453071
      WBInteraction000453521
      WBInteraction000459876
      WBInteraction000500252
      WBInteraction000500253
      WBInteraction000500254
      WBInteraction000504374
      WBInteraction000504375
      WBInteraction000504376
      WBInteraction000539163
      WBInteraction000550080
      WBInteraction000554017
      WBInteraction000577945
  Map_info: Map: III Position: 21.3196 Error: 0.002695
    Positive: Positive_clone: T12D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026715
    WBPaper00027281
    WBPaper00031586
    WBPaper00032932
    WBPaper00036246
    WBPaper00037449
    WBPaper00038491
    WBPaper00055090
    WBPaper00062599
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene