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WormBase Tree Display for Gene: WBGene00010502

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Name Class

WBGene00010502SMapS_parentSequenceK02C4
IdentityVersion1
NameSequence_nameK02C4.3
Molecular_name (15)
Other_nameCELE_K02C4.3Accession_evidenceNDBBX284602
Public_nameK02C4.3
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (71)
RNASeq_FPKM (73)
GO_annotation (12)
OrthologWBGene00024081Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00161762Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00193248Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00053779Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00224174Brugia malayiFrom_analysisWormBase-Compara
WBGene00225015Brugia malayiFrom_analysisWormBase-Compara
WBGene00227709Brugia malayiFrom_analysisWormBase-Compara
WBGene00233153Brugia malayiFrom_analysisWormBase-Compara
CSP21.g3930Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g8501Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g21194Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6450Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9390Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g286Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g5915Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5027Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00078.g3610Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g4623Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g4647Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g10298Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00584.g13162Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_23657Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005109Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09746Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11455Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6689Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20151900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5156Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237722Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246391Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247664Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248352Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00113286Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00289030Trichuris murisFrom_analysisWormBase-Compara
WBGene00290612Trichuris murisFrom_analysisWormBase-Compara
SGD:S000005650Saccharomyces cerevisiaeFrom_analysisOrthoFinder
OrthoInspector
ZFIN:ZDB-GENE-040426-2847Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-041008-142Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:12624Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
HGNC:12625Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
MGI:1353655Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
MGI:2442293Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
RGD:1309003Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
RGD:1311555Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in regulation of protein stability. Predicted to be located in cytosol and nucleus. Is an ortholog of human USP25 (ubiquitin specific peptidase 25) and USP28 (ubiquitin specific peptidase 28).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK02C4.3a
K02C4.3b
K02C4.3c
K02C4.3d
K02C4.3e
Corresponding_CDS_historyK02C4.3:wp175
K02C4.3:wp229
K02C4.3:wp252
Corresponding_transcriptK02C4.3a.1
K02C4.3b.1
K02C4.3c.1
K02C4.3d.1
K02C4.3e.1
Other_sequenceTcir_isotig13596
Associated_featureWBsf665765
WBsf665766
WBsf223439
Experimental_infoRNAi_resultWBRNAi00016441Inferred_automaticallyRNAi_primary
WBRNAi00094633Inferred_automaticallyRNAi_primary
WBRNAi00049682Inferred_automaticallyRNAi_primary
WBRNAi00076539Inferred_automaticallyRNAi_primary
Expr_patternExpr1023400
Expr1034589
Expr1153406
Expr2004676
Expr2022902
Drives_constructWBCnstr00031370
Construct_productWBCnstr00031370
Microarray_results (20)
Expression_cluster (176)
InteractionWBInteraction000176950
WBInteraction000211431
WBInteraction000219596
WBInteraction000223861
WBInteraction000228151
WBInteraction000233976
WBInteraction000249400
WBInteraction000254152
WBInteraction000254549
WBInteraction000255589
WBInteraction000255598
WBInteraction000256085
WBInteraction000264451
WBInteraction000274612
WBInteraction000275201
WBInteraction000281251
WBInteraction000286019
WBInteraction000290135
WBInteraction000293371
WBInteraction000297110
WBInteraction000299594
WBInteraction000299742
WBInteraction000302492
WBInteraction000303498
WBInteraction000304822
WBInteraction000314210
WBInteraction000314722
WBInteraction000318982
WBInteraction000335623
WBInteraction000337969
WBInteraction000340063
WBInteraction000345237
WBInteraction000353212
WBInteraction000358961
WBInteraction000359074
WBInteraction000359428
WBInteraction000364021
WBInteraction000364571
WBInteraction000370711
WBInteraction000371025
WBInteraction000372306
WBInteraction000378314
WBInteraction000382079
WBInteraction000383098
WBInteraction000395803
WBInteraction000400985
WBInteraction000401683
WBInteraction000402989
WBInteraction000403342
WBInteraction000406453
WBInteraction000408063
WBInteraction000412340
WBInteraction000419560
WBInteraction000419603
WBInteraction000422796
WBInteraction000425212
WBInteraction000435280
WBInteraction000437382
WBInteraction000437792
WBInteraction000437836
WBInteraction000438887
WBInteraction000445789
WBInteraction000451013
WBInteraction000451897
WBInteraction000452346
WBInteraction000459929
WBInteraction000462491
WBInteraction000552204
WBInteraction000579635
WBInteraction000585531
Map_infoPositivePositive_cloneK02C4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.662956
ReferenceWBPaper00030965
WBPaper00038491
WBPaper00055090
MethodGene