WormBase Tree Display for Gene: WBGene00019998

WBGene00019998 SMap: S_parent: Sequence: R10H1
  Identity: Version: 1
    Name: Sequence_name: R10H1.1
      Molecular_name: R10H1.1
        R10H1.1.1
        CE31820
      Other_name: CELE_R10H1.1 Accession_evidence: NDB BX284602
      Public_name: R10H1.1
    DB_info: Database: AceView gene 2H785
        WormQTL gene WBGene00019998
        WormFlux gene WBGene00019998
        NDB locus_tag CELE_R10H1.1
        Panther gene CAEEL|WormBase=WBGene00019998|UniProtKB=Q10043
          family PTHR22115
        NCBI gene 259445
        RefSeq protein NM_063167.13
        SwissProt UniProtAcc Q10043
        TREEFAM TREEFAM_ID TF320071
        UniProt_GCRP UniProtAcc Q10043
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (29)
    RNASeq_FPKM (74)
    Ortholog (18)
    Structured_description: Automated_description: Enriched in several structures, including anterior hypodermis; body wall musculature; interfacial epithelial cell; intestine; and rectal gland cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and dpy-10 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by nine chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Coiled-coil domain-containing protein 50; Coiled-coil domain-containing protein 50, N-terminal; and Coiled-coil domain-containing protein 50 N-terminus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R10H1.1
    Corresponding_CDS_history: R10H1.1:wp85
    Corresponding_transcript: R10H1.1.1
    Other_sequence: CSC02172_1
      FD517248.1
    Associated_feature: WBsf657170
      WBsf657826
      WBsf988462
      WBsf221599
  Experimental_info: RNAi_result: WBRNAi00051734 Inferred_automatically: RNAi_primary
      WBRNAi00017725 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025223
      Expr1038684
      Expr1155399
      Expr2005565
      Expr2023783
    Drives_construct: WBCnstr00025441
    Construct_product: WBCnstr00025441
    Microarray_results: SMD_R10H1.1
      190234_at
      A_12_P101775
      Aff_R10H1.1
      GPL13394_WBGene00019998
      GPL13914_R10H1.1
      GPL14144_R10H1.1_170-229_0.947_1_A
      GPL14144_R10H1.1_349-408_0.945_2_B
      GPL14144_R10H1.1_49-108_0.860_14_C
      GPL19516_CGZ0031812
      GPL21109_R10H1.1
      GPL8304_CE_WBGene00019998_A
      GPL8304_CE_WBGene00019998_B
      GPL8673_R10H1_1P00079
      GPL8673_R10H1_1P00106
      GPL8673_R10H1_1P00194
      GPL9450_R10H1.1
      cea2.c.13730
    Expression_cluster (159)
    Interaction: WBInteraction000197747
      WBInteraction000198053
      WBInteraction000203013
      WBInteraction000213887
      WBInteraction000215385
      WBInteraction000223667
      WBInteraction000224355
      WBInteraction000247438
      WBInteraction000256872
      WBInteraction000259337
      WBInteraction000261645
      WBInteraction000262696
      WBInteraction000263716
      WBInteraction000265238
      WBInteraction000268340
      WBInteraction000276805
      WBInteraction000285370
      WBInteraction000287599
      WBInteraction000292855
      WBInteraction000295691
      WBInteraction000296076
      WBInteraction000303018
      WBInteraction000319146
      WBInteraction000319809
      WBInteraction000321283
      WBInteraction000323063
      WBInteraction000323307
      WBInteraction000324348
      WBInteraction000330343
      WBInteraction000331063
      WBInteraction000336445
      WBInteraction000339225
      WBInteraction000343371
      WBInteraction000349264
      WBInteraction000355033
      WBInteraction000356398
      WBInteraction000356789
      WBInteraction000357670
      WBInteraction000359210
      WBInteraction000359390
      WBInteraction000359458
      WBInteraction000359867
      WBInteraction000365540
      WBInteraction000367073
      WBInteraction000369679
      WBInteraction000371143
      WBInteraction000379424
      WBInteraction000382364
      WBInteraction000382440
      WBInteraction000386272
      WBInteraction000386458
      WBInteraction000391041
      WBInteraction000393028
      WBInteraction000395525
      WBInteraction000395947
      WBInteraction000402808
      WBInteraction000405872
      WBInteraction000411312
      WBInteraction000433080
      WBInteraction000435476
      WBInteraction000437743
      WBInteraction000440737
      WBInteraction000441725
      WBInteraction000442942
      WBInteraction000444098
      WBInteraction000446240
      WBInteraction000450879
      WBInteraction000452602
      WBInteraction000454111
      WBInteraction000454161
      WBInteraction000456216
      WBInteraction000458340
      WBInteraction000458363
      WBInteraction000458673
      WBInteraction000460572
      WBInteraction000581138
  Map_info: Positive: Positive_clone: R10H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.5034
  Method: Gene