WormBase Tree Display for Gene: WBGene00016421

WBGene00016421 SMap: S_parent: Sequence: C34G6
  Identity: Version: 2
    Name: CGC_name: cdc-7 Person_evidence: WBPerson150
      Sequence_name: C34G6.5
      Molecular_name: C34G6.5
        C34G6.5.1
        CE26909
      Other_name: CELE_C34G6.5 Accession_evidence: NDB BX284601
      Public_name: cdc-7
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 25 Nov 2011 15:06:27 WBPerson2970 Name_change: CGC_name: cdc-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cdc
    Allele (26)
    Strain: WBStrain00031912
      WBStrain00051815
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (37)
    Paralog (93)
    Structured_description: Automated_description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in several processes, including endocytosis; positive regulation of canonical Wnt signaling pathway; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in nucleus. Is an ortholog of human CDC7 (cell division cycle 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34G6.5
    Corresponding_transcript: C34G6.5.1
    Other_sequence: CR03294
      CBC17323_1
      CBC04786_1
      CJC13748_1
      CRC01215_1
    Associated_feature: WBsf643321
      WBsf656339
      WBsf976715
      WBsf976716
      WBsf976717
      WBsf983789
      WBsf217720
  Experimental_info: RNAi_result: WBRNAi00003084 Inferred_automatically: RNAi_primary
      WBRNAi00041931 Inferred_automatically: RNAi_primary
      WBRNAi00077820 Inferred_automatically: RNAi_primary
      WBRNAi00116446 Inferred_automatically: RNAi_primary
      WBRNAi00007785 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13066
      Expr1024275
      Expr1037038
      Expr1145938
      Expr2009792
      Expr2028032
    Drives_construct: WBCnstr00028081
    Construct_product: WBCnstr00021070
      WBCnstr00028081
    Microarray_results: SMD_C34G6.5
      175514_at
      190606_at
      A_12_P108073
      Aff_C34G6.5
      GPL13394_WBGene00016421
      GPL13914_C34G6.5
      GPL14144_C34G6.5_1082-1141_0.817_73_C
      GPL14144_C34G6.5_899-958_0.945_1_A
      GPL14144_C34G6.5_960-1019_0.942_2_B
      GPL19516_CGZ0007588
      GPL21109_C34G6.5
      GPL3518_CE26909
      GPL8304_CE_WBGene00016421_A
      GPL8304_CE_WBGene00016421_B
      GPL8673_C34G6_5P00029
      GPL8673_C34G6_5P00875
      GPL8673_C34G6_5P01089
      GPL9450_C34G6.5
      cea2.p.03485
    Expression_cluster (154)
    Interaction: WBInteraction000033396
      WBInteraction000035513
      WBInteraction000040066
      WBInteraction000040451
      WBInteraction000041923
      WBInteraction000041924
      WBInteraction000042900
      WBInteraction000043957
      WBInteraction000044257
      WBInteraction000045990
      WBInteraction000047831
      WBInteraction000140274
      WBInteraction000172254
      WBInteraction000190996
      WBInteraction000202726
      WBInteraction000202813
      WBInteraction000206479
      WBInteraction000208306
      WBInteraction000222955
      WBInteraction000224483
      WBInteraction000229951
      WBInteraction000230949
      WBInteraction000234446
      WBInteraction000235775
      WBInteraction000241331
      WBInteraction000245204
      WBInteraction000249244
      WBInteraction000256668
      WBInteraction000258431
      WBInteraction000261521
      WBInteraction000261580
      WBInteraction000266110
      WBInteraction000273891
      WBInteraction000276464
      WBInteraction000279842
      WBInteraction000279948
      WBInteraction000281609
      WBInteraction000282205
      WBInteraction000283272
      WBInteraction000283545
      WBInteraction000291638
      WBInteraction000302967
      WBInteraction000303016
      WBInteraction000303643
      WBInteraction000305913
      WBInteraction000306522
      WBInteraction000308650
      WBInteraction000308699
      WBInteraction000309989
      WBInteraction000315598
      WBInteraction000316666
      WBInteraction000320443
      WBInteraction000321902
      WBInteraction000324182
      WBInteraction000325076
      WBInteraction000325099
      WBInteraction000327769
      WBInteraction000329338
      WBInteraction000329859
      WBInteraction000332800
      WBInteraction000333615
      WBInteraction000333834
      WBInteraction000334419
      WBInteraction000336609
      WBInteraction000340091
      WBInteraction000343275
      WBInteraction000343493
      WBInteraction000347262
      WBInteraction000351150
      WBInteraction000360165
      WBInteraction000361921
      WBInteraction000363759
      WBInteraction000365558
      WBInteraction000366837
      WBInteraction000367363
      WBInteraction000367496
      WBInteraction000373109
      WBInteraction000374200
      WBInteraction000375430
      WBInteraction000375666
      WBInteraction000376843
      WBInteraction000377240
      WBInteraction000378867
      WBInteraction000380106
      WBInteraction000380868
      WBInteraction000381298
      WBInteraction000382484
      WBInteraction000382640
      WBInteraction000383044
      WBInteraction000385503
      WBInteraction000388925
      WBInteraction000389014
      WBInteraction000389536
      WBInteraction000389803
      WBInteraction000390499
      WBInteraction000391241
      WBInteraction000397220
      WBInteraction000398684
      WBInteraction000398849
      WBInteraction000399155
      WBInteraction000401009
      WBInteraction000401431
      WBInteraction000403044
      WBInteraction000403176
      WBInteraction000403767
      WBInteraction000407989
      WBInteraction000408355
      WBInteraction000408633
      WBInteraction000416340
      WBInteraction000417905
      WBInteraction000419211
      WBInteraction000420094
      WBInteraction000420664
      WBInteraction000422291
      WBInteraction000423383
      WBInteraction000426478
      WBInteraction000428536
      WBInteraction000430088
      WBInteraction000430243
      WBInteraction000431033
      WBInteraction000431158
      WBInteraction000434686
      WBInteraction000435312
      WBInteraction000439851
      WBInteraction000440025
      WBInteraction000444838
      WBInteraction000445742
      WBInteraction000450475
      WBInteraction000456945
      WBInteraction000459767
  Map_info: Map: I Position: 0.472118
    Positive: Positive_clone: C34G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027258
    WBPaper00038491
    WBPaper00043250
    WBPaper00045289
    WBPaper00046077
    WBPaper00049963
    WBPaper00055090
    WBPaper00055989
    WBPaper00064339
    WBPaper00066002
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene