WormBase Tree Display for Gene: WBGene00013958

WBGene00013958 SMap: S_parent: Sequence: ZK265
  Identity: Version: 2
    Name: CGC_name: nol-16 Person_evidence: WBPerson3772
            WBPerson38007
      Sequence_name: ZK265.6
      Molecular_name: ZK265.6
        ZK265.6.1
        CE15299
      Other_name: NOP16
        CELE_ZK265.6 Accession_evidence: NDB BX284601
      Public_name: nol-16
    DB_info: Database: AceView gene 1I831
        WormQTL gene WBGene00013958
        WormFlux gene WBGene00013958
        NDB locus_tag CELE_ZK265.6
        Panther gene CAEEL|WormBase=WBGene00013958|UniProtKB=Q94402
          family PTHR13243
        NCBI gene 191277
        RefSeq protein NM_059847.6
        SwissProt UniProtAcc Q94402
        TREEFAM TREEFAM_ID TF323541
        UniProt_GCRP UniProtAcc Q94402
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Aug 2017 12:58:54 WBPerson2970 Name_change: CGC_name: nol-16
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nol
    Allele (21)
    Strain: WBStrain00047583
    RNASeq_FPKM (74)
    GO_annotation: 00087707
      00087708
      00087709
      00087710
      00087711
      00087712
    Ortholog (34)
    Structured_description: Automated_description: Predicted to be involved in ribosomal large subunit biogenesis. Located in nucleolus. Is an ortholog of human NOP16 (NOP16 nucleolar protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK265.6
    Corresponding_transcript: ZK265.6.1
    Other_sequence: TS01434
      HC07586
      CR04163
      CJC01311_1
      CRC06447_1
      TSC05389_1
      CBC07365_1
      Dviv_isotig27885
      CJC06787_1
    Associated_feature: WBsf643516
      WBsf656615
      WBsf984385
      WBsf1010206
      WBsf218135
      WBsf218136
  Experimental_info: RNAi_result (19)
    Expr_pattern: Expr9476
      Expr1020946
      Expr1036239
      Expr1162748
      Expr2008804
      Expr2027038
    Drives_construct: WBCnstr00029414
    Construct_product: WBCnstr00014041
      WBCnstr00029414
    Microarray_results: SMD_ZK265.6
      186929_at
      A_12_P114816
      A_12_P159941
      Aff_ZK265.6
      GPL13394_WBGene00013958
      GPL13914_ZK265.6
      GPL14144_ZK265.6_121-180_0.923_15_B
      GPL14144_ZK265.6_444-503_0.943_12_C
      GPL14144_ZK265.6_494-553_0.977_1_A
      GPL19516_CGZ0056608
      GPL21109_ZK265.6
      GPL3518_CE15299
      GPL8304_CE_WBGene00013958_A
      GPL8304_CE_WBGene00013958_B
      GPL8304_CE_WBGene00013958_C
      GPL8673_ZK265_6P00160
      GPL8673_ZK265_6P00398
      GPL8673_ZK265_6P00511
      GPL9450_ZK265.6
      cea2.i.07603
    Expression_cluster (142)
    Interaction: WBInteraction000121337
      WBInteraction000146476
      WBInteraction000153043
      WBInteraction000181501
      WBInteraction000182955
      WBInteraction000189286
      WBInteraction000189611
      WBInteraction000191852
      WBInteraction000200067
      WBInteraction000201226
      WBInteraction000205287
      WBInteraction000208162
      WBInteraction000210735
      WBInteraction000210978
      WBInteraction000211917
      WBInteraction000241614
      WBInteraction000241735
      WBInteraction000244303
      WBInteraction000256782
      WBInteraction000256963
      WBInteraction000257182
      WBInteraction000269811
      WBInteraction000280711
      WBInteraction000294187
      WBInteraction000300487
      WBInteraction000302049
      WBInteraction000309560
      WBInteraction000318482
      WBInteraction000321548
      WBInteraction000338002
      WBInteraction000349837
      WBInteraction000352538
      WBInteraction000356483
      WBInteraction000360029
      WBInteraction000364533
      WBInteraction000376466
      WBInteraction000377149
      WBInteraction000380582
      WBInteraction000386654
      WBInteraction000401564
      WBInteraction000403373
      WBInteraction000416539
      WBInteraction000423364
      WBInteraction000426314
      WBInteraction000432621
      WBInteraction000432982
      WBInteraction000437841
      WBInteraction000438070
      WBInteraction000443592
      WBInteraction000443782
      WBInteraction000445050
      WBInteraction000446642
      WBInteraction000450042
      WBInteraction000457568
      WBInteraction000458163
      WBInteraction000461041
      WBInteraction000575304
  Map_info: Map: I Position: 2.70349
    Positive: Positive_clone: ZK265 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene