WormBase Tree Display for Gene: WBGene00009793

WBGene00009793 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 2
    Name: CGC_name: pkn-1 Person_evidence: WBPerson56
            WBPerson505
      Sequence_name: F46F6.2
      Molecular_name (12)
      Other_name: CELE_F46F6.2 Accession_evidence: NDB BX284606
      Public_name: pkn-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 19 Feb 2010 11:41:45 WBPerson2970 Name_change: CGC_name: pkn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pkn
    Allele (71)
    Strain: WBStrain00002832
      WBStrain00036580
    RNASeq_FPKM (74)
    GO_annotation (22)
    Ortholog (43)
    Paralog (14)
    Structured_description: Automated_description: Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Located in M band and striated muscle dense body. Expressed in neurons and pharyngeal muscle cell. Is an ortholog of human PKN3 (protein kinase N3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F46F6.2a
      F46F6.2b
      F46F6.2c
      F46F6.2d
    Corresponding_CDS_history: F46F6.2:wp83
      F46F6.2b:wp271
    Corresponding_transcript: F46F6.2a.1
      F46F6.2b.1
      F46F6.2c.1
      F46F6.2d.1
    Other_sequence (35)
    Associated_feature (14)
  Experimental_info: RNAi_result: WBRNAi00047564 Inferred_automatically: RNAi_primary
      WBRNAi00109716 Inferred_automatically: RNAi_primary
      WBRNAi00001225 Inferred_automatically: RNAi_primary
      WBRNAi00032385 Inferred_automatically: RNAi_primary
      WBRNAi00015119 Inferred_automatically: RNAi_primary
      WBRNAi00021734 Inferred_automatically: RNAi_primary
      WBRNAi00109763 Inferred_automatically: RNAi_primary
      WBRNAi00076440 Inferred_automatically: RNAi_primary
      WBRNAi00109669 Inferred_automatically: RNAi_primary
      WBRNAi00109810 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1838
      Expr6091
      Expr9387
      Expr11211
      Expr11212
      Expr1015556
      Expr1034280
      Expr1151402
      Expr2014949
      Expr2033184
    Drives_construct: WBCnstr00003354
      WBCnstr00018222
      WBCnstr00031916
    Construct_product: WBCnstr00013952
      WBCnstr00018223
      WBCnstr00031916
    Microarray_results: SMD_F46F6.2
      SMD_ZC504.5
      174725_at
      192159_at
      A_12_P111453
      Aff_F46F6.2
      GPL13394_WBGene00009793
      GPL13914_F46F6.2
      GPL14144_F46F6.2b_2879-2938_0.905_8_C
      GPL14144_F46F6.2b_3206-3265_0.938_1_A
      GPL14144_F46F6.2b_3305-3364_0.928_4_B
      GPL19516_CGZ0022203
      GPL19516_CGZ0022204
      GPL21109_F46F6.2a
      GPL3518_CE31703
      GPL8304_CE_WBGene00009793_A
      GPL8304_CE_WBGene00009793_B
      GPL8673_F46F6_2P01954
      GPL8673_F46F6_2P02720
      GPL8673_F46F6_2P02957
      GPL9450_F46F6.2
      cea2.p.144980
    Expression_cluster (143)
    Interaction: WBInteraction000033379
      WBInteraction000033380
      WBInteraction000113430
      WBInteraction000150227
      WBInteraction000163032
      WBInteraction000163033
      WBInteraction000167451
      WBInteraction000167738
      WBInteraction000167739
      WBInteraction000169893
      WBInteraction000172925
      WBInteraction000173707
      WBInteraction000174256
      WBInteraction000174257
      WBInteraction000208984
      WBInteraction000225944
      WBInteraction000229608
      WBInteraction000232452
      WBInteraction000249535
      WBInteraction000264903
      WBInteraction000274607
      WBInteraction000301828
      WBInteraction000328575
      WBInteraction000330530
      WBInteraction000330652
      WBInteraction000335885
      WBInteraction000336811
      WBInteraction000342352
      WBInteraction000343827
      WBInteraction000353113
      WBInteraction000356409
      WBInteraction000375257
      WBInteraction000379422
      WBInteraction000381158
      WBInteraction000381248
      WBInteraction000381813
      WBInteraction000389856
      WBInteraction000390459
      WBInteraction000391699
      WBInteraction000393658
      WBInteraction000394156
      WBInteraction000397860
      WBInteraction000398775
      WBInteraction000401390
      WBInteraction000402400
      WBInteraction000406770
      WBInteraction000408728
      WBInteraction000411264
      WBInteraction000415828
      WBInteraction000416369
      WBInteraction000417041
      WBInteraction000431347
      WBInteraction000455930
      WBInteraction000460736
      WBInteraction000522420
      WBInteraction000522421
      WBInteraction000522422
      WBInteraction000567764
      WBInteraction000581369
  Map_info: Map: X Position: 2.17965 Error: 0.004397
    Positive: Positive_clone: F46F6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027258
    WBPaper00038084
    WBPaper00038444
    WBPaper00038491
    WBPaper00038843
    WBPaper00040494
    WBPaper00055090
    WBPaper00057543
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene