WormBase Tree Display for Gene: WBGene00009608
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| WBGene00009608 | SMap | S_parent | Sequence | F41D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-265 | Person_evidence | WBPerson600 | |||||
| Sequence_name | F41D3.3 | ||||||||
| Molecular_name | F41D3.3 | ||||||||
| F41D3.3.1 | |||||||||
| CE16022 | |||||||||
| Other_name | CELE_F41D3.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nhr-265 | ||||||||
| DB_info | Database | AceView | gene | 1M841 | |||||
| WormQTL | gene | WBGene00009608 | |||||||
| WormFlux | gene | WBGene00009608 | |||||||
| NDB | locus_tag | CELE_F41D3.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009608|UniProtKB=O45507 | |||||||
| family | PTHR46397 | ||||||||
| NCBI | gene | 185603 | |||||||
| RefSeq | protein | NM_060691.2 | |||||||
| TREEFAM | TREEFAM_ID | TF321941 | |||||||
| TrEMBL | UniProtAcc | O45507 | |||||||
| UniProt_GCRP | UniProtAcc | O45507 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-265 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034659 | ||||||||
| 00034660 | |||||||||
| 00034661 | |||||||||
| 00034662 | |||||||||
| 00117245 | |||||||||
| 00117246 | |||||||||
| 00117247 | |||||||||
| 00117248 | |||||||||
| Ortholog (19) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41D3.3 | |||||||
| Corresponding_transcript | F41D3.3.1 | ||||||||
| Transcription_factor | WBTranscriptionFactor000531 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00092055 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003651 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046976 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113952 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013200 | ||||||||
| Expr1150838 | |||||||||
| Expr2014156 | |||||||||
| Expr2032400 | |||||||||
| Drives_construct | WBCnstr00032061 | ||||||||
| Construct_product | WBCnstr00032061 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (75) | |||||||||
| Interaction | WBInteraction000113317 | ||||||||
| WBInteraction000115212 | |||||||||
| WBInteraction000118544 | |||||||||
| WBInteraction000145845 | |||||||||
| WBInteraction000148996 | |||||||||
| WBInteraction000196542 | |||||||||
| WBInteraction000198654 | |||||||||
| WBInteraction000210551 | |||||||||
| WBInteraction000212860 | |||||||||
| WBInteraction000215733 | |||||||||
| WBInteraction000218488 | |||||||||
| WBInteraction000221648 | |||||||||
| WBInteraction000238100 | |||||||||
| WBInteraction000250204 | |||||||||
| WBInteraction000277909 | |||||||||
| WBInteraction000282337 | |||||||||
| WBInteraction000284808 | |||||||||
| WBInteraction000285117 | |||||||||
| WBInteraction000293306 | |||||||||
| WBInteraction000303446 | |||||||||
| WBInteraction000312018 | |||||||||
| WBInteraction000314261 | |||||||||
| WBInteraction000318627 | |||||||||
| WBInteraction000325357 | |||||||||
| WBInteraction000332865 | |||||||||
| WBInteraction000334816 | |||||||||
| WBInteraction000392832 | |||||||||
| WBInteraction000410503 | |||||||||
| WBInteraction000438466 | |||||||||
| WBInteraction000450114 | |||||||||
| WBInteraction000519935 | |||||||||
| WBInteraction000526876 | |||||||||
| WBInteraction000529990 | |||||||||
| Map_info | Map | I | Position | 13.0994 | Error | 0.003721 | |||
| Positive | Positive_clone | F41D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5408 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
