WormBase Tree Display for Gene: WBGene00017962
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WBGene00017962 | SMap | S_parent | Sequence | F31F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fbxa-72 | Person_evidence | WBPerson655 | |||||
Sequence_name | F31F4.15 | ||||||||
Molecular_name | F31F4.15a | ||||||||
F31F4.15a.1 | |||||||||
CE50796 | |||||||||
F31F4.15b | |||||||||
CE50826 | |||||||||
F31F4.15b.1 | |||||||||
Other_name | CELE_F31F4.15 | Accession_evidence | NDB | BX284605 | |||||
Public_name | fbxa-72 | ||||||||
DB_info | Database | AceView | gene | 5B150 | |||||
WormQTL | gene | WBGene00017962 | |||||||
WormFlux | gene | WBGene00017962 | |||||||
NDB | locus_tag | CELE_F31F4.15 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017962|UniProtKB=A0A0K3ARZ7 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 185173 | |||||||
RefSeq | protein | NM_001313164.3 | |||||||
NM_001313163.5 | |||||||||
TrEMBL | UniProtAcc | A0A0K3ARZ7 | |||||||
A0A0K3AVH4 | |||||||||
UniProt_GCRP | UniProtAcc | A0A0K3ARZ7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-72 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fbxa | ||||||||
Allele (137) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (44) | |||||||||
Paralog (225) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including Z1.p; body wall muscle cell from C lineage; intestine; male distal tip cell; and somatic gonad precursor based on tiling array; RNA-seq; proteomic; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-four chemicals including Tunicamycin; sodium arsenite; and indole based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F31F4.15a | |||||||
F31F4.15b | |||||||||
Corresponding_CDS_history | F31F4.15:wp248 | ||||||||
Corresponding_transcript | F31F4.15a.1 | ||||||||
F31F4.15b.1 | |||||||||
Other_sequence | CBC06146_1 | ||||||||
Associated_feature | WBsf233285 | ||||||||
Experimental_info | RNAi_result | WBRNAi00031633 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046043 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014166 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00114472 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018864 | ||||||||
Expr1149936 | |||||||||
Expr2011572 | |||||||||
Expr2029810 | |||||||||
Drives_construct | WBCnstr00026884 | ||||||||
Construct_product | WBCnstr00026884 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (256) | |||||||||
Interaction (14) | |||||||||
Map_info | Map | V | Position | -19.9665 | |||||
Positive | Positive_clone | F31F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00065331 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |