WormBase Tree Display for Gene: WBGene00021427
expand all nodes | collapse all nodes | view schema
| WBGene00021427 | SMap | S_parent | Sequence | Y38F2AR | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | sec | |||||
| Allele | WBVar01499166 | |||||
| WBVar01498316 | ||||||
| WBVar01499633 | ||||||
| WBVar02034363 | ||||||
| WBVar00250946 | ||||||
| WBVar01803457 | ||||||
| WBVar00892446 | ||||||
| WBVar00892447 | ||||||
| WBVar00419268 | ||||||
| WBVar01500062 | ||||||
| Strain | WBStrain00007585 | |||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation (14) | ||||||
| Ortholog (37) | ||||||
| Structured_description | Automated_description | Predicted to be involved in SRP-dependent cotranslational protein targeting to membrane, translocation and post-translational protein targeting to membrane, translocation. Predicted to be located in membrane. Predicted to be part of Sec61 translocon complex. Is an ortholog of human SEC61B (SEC61 translocon subunit beta). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y38F2AR.9 | ||||
| Corresponding_transcript | Y38F2AR.9.1 | |||||
| Other_sequence (74) | ||||||
| Associated_feature | WBsf667775 | |||||
| WBsf229812 | ||||||
| WBsf229813 | ||||||
| Experimental_info | RNAi_result | WBRNAi00056056 | Inferred_automatically | RNAi_primary | ||
| Expr_pattern | Expr13442 | |||||
| Expr1014438 | ||||||
| Expr1039361 | ||||||
| Expr1159579 | ||||||
| Expr2007317 | ||||||
| Expr2025552 | ||||||
| Construct_product | WBCnstr00039536 | |||||
| Microarray_results (20) | ||||||
| Expression_cluster (192) | ||||||
| Interaction (26) | ||||||
| Map_info | Map | IV | Position | -7.67607 | ||
| Positive | Positive_clone | Y38F2AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00025393 | |||||
| WBPaper00038491 | ||||||
| WBPaper00053387 | ||||||
| WBPaper00055090 | ||||||
| WBPaper00061328 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
