WormBase Tree Display for Gene: WBGene00020153
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WBGene00020153 | SMap | S_parent | Sequence | T01G6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-212 | Person_evidence | WBPerson600 | |||||
Sequence_name | T01G6.6 | ||||||||
Molecular_name | T01G6.6a | ||||||||
T01G6.6a.1 | |||||||||
CE35608 | |||||||||
T01G6.6b | |||||||||
CE42457 | |||||||||
T01G6.6b.1 | |||||||||
Other_name | CELE_T01G6.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-212 | ||||||||
DB_info | Database | AceView | gene | 5A963 | |||||
WormQTL | gene | WBGene00020153 | |||||||
WormFlux | gene | WBGene00020153 | |||||||
NDB | locus_tag | CELE_T01G6.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020153|UniProtKB=B1GRK7 | |||||||
family | PTHR45680 | ||||||||
NCBI | gene | 187964 | |||||||
RefSeq | protein | NM_070816.5 | |||||||
NM_001129523.4 | |||||||||
TrEMBL | UniProtAcc | H2L0I0 | |||||||
B1GRK7 | |||||||||
UniProt_GCRP | UniProtAcc | B1GRK7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-212 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (134) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00005252 | ||||||||
00005253 | |||||||||
00005254 | |||||||||
00119616 | |||||||||
00119617 | |||||||||
00119618 | |||||||||
00119619 | |||||||||
Contained_in_operon | CEOP5020 | ||||||||
Ortholog (54) | |||||||||
Paralog (217) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T01G6.6a | |||||||
T01G6.6b | |||||||||
Corresponding_CDS_history | T01G6.6:wp108 | ||||||||
T01G6.6:wp188 | |||||||||
Corresponding_transcript | T01G6.6a.1 | ||||||||
T01G6.6b.1 | |||||||||
Associated_feature | WBsf646635 | ||||||||
WBsf999171 | |||||||||
WBsf999172 | |||||||||
WBsf231338 | |||||||||
Transcription_factor | WBTranscriptionFactor000608 | ||||||||
Experimental_info | RNAi_result | WBRNAi00052153 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035028 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017989 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026231 | ||||||||
Expr1038764 | |||||||||
Expr1155788 | |||||||||
Expr2014116 | |||||||||
Expr2032355 | |||||||||
Drives_construct | WBCnstr00025338 | ||||||||
Construct_product | WBCnstr00025338 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (129) | |||||||||
Interaction | WBInteraction000320252 | ||||||||
WBInteraction000453049 | |||||||||
Map_info | Map | V | Position | -19.9885 | |||||
Positive | Positive_clone | T01G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5347 | |||||||
5367 | |||||||||
4989 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |