WormBase Tree Display for Gene: WBGene00006747
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WBGene00006747 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | unc-7 | Person_evidence | WBPerson261 | |||
Sequence_name | R07D5.1 | ||||||
Molecular_name (31) | |||||||
Other_name | unc-12 | ||||||
unc-124 | Person_evidence (2) | ||||||
CELE_R07D5.1 | Accession_evidence | NDB | BX284606 | ||||
Public_name | unc-7 | ||||||
DB_info | Database | AceView | gene | XP740 | |||
WormQTL | gene | WBGene00006747 | |||||
WormFlux | gene | WBGene00006747 | |||||
NDB | locus_tag | CELE_R07D5.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00006747|UniProtKB=Q03412 | |||||
family | PTHR11893 | ||||||
NCBI | gene | 181608 | |||||
RefSeq | protein | NM_001350352.4 | |||||
NM_001350353.4 | |||||||
NM_001270327.3 | |||||||
NM_001350355.3 | |||||||
NM_001350356.3 | |||||||
NM_001350358.3 | |||||||
NM_001350354.3 | |||||||
NM_001392896.1 | |||||||
NM_001270326.3 | |||||||
NM_001350357.3 | |||||||
SwissProt | UniProtAcc | Q03412 | |||||
TrEMBL | UniProtAcc | A0A1T5HUM5 | |||||
C8JQR8 | |||||||
A0A1T5HUM9 | |||||||
A0A1T5HUM1 | |||||||
A0A1T5HUM6 | |||||||
A0A1T5HUM7 | |||||||
A0A1T5HUM3 | |||||||
C8JQR7 | |||||||
A0A1T5HUN4 | |||||||
UniProt_GCRP | UniProtAcc | Q03412 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | unc | ||||||
Reference_allele | WBVar00142903 | ||||||
Allele (496) | |||||||
Legacy_information | e5 : moves backward better than forward kinker in forward movement active healthy slightly thin. ES3 ME0. NA5 (e42 e65 (pka unc-12) etc.). | ||||||
See unc-7. | |||||||
See also e65 | |||||||
[C.elegansII] e5 : moves backward better than forward, kinker in forward movement, active, healthy, slightly thin. Suppresses anaesthetic hypersensitivity of unc-79 and unc-80 mutants. e5/Df similar, null phenotype.ES3 ME0. OA>20: e42, e65 (pka unc-12, weaker), bx5::Tc1, st197, mn384 (weaker allele), etc.; also revertants bx5mn369 etc. Cloned: main transcript 2.9 kb, encodes predicted 522 aa membrane protein related to EAT-5, Drosophila passover (26%identity), etc; possible gap junction component. [Starich et al. 1993; Morgan and Sedensky 1994; EH; SP] | |||||||
[Hecht RM ] cold sensitive, uncoordinated kinker at 11C, WT at 23C, phenotype reversible within hours of temperature shift, throughout development. Dominant interaction with some unc-7 alleles. NA1. | |||||||
[C.elegansII] hs10cs : uncoordinated at 11C, kinker;WT 23C; phenotype reversible within hoursof temp shift, throughout development. Dominant interaction with some unc-7vt-4alleles. NA1,[HH] | |||||||
Strain (12) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (41) | |||||||
Ortholog (33) | |||||||
Paralog (24) | |||||||
Structured_description | Concise_description | unc-7 encodes an innexin required for gap junction formation in invertebrates; UNC-7 is also required for normal locomotion, egg-laying, inhibition of feeding by tapping, avermectin sensitivity, and ivermectin sensitivity, as well as for the antagonism of UNC-79 and UNC-80 activity by volatile anesthetics; unc-7 is genetically required, and transcribed in, neurons rather than muscle cells, from larval stages L1 through L4; homologs of UNC-7 include Drosophila OGRE and SHAKING-B, as well as 24 C. elegans paralogs (including EAT-5, UNC-9, and INX-1 through INX-20); UNC-7 genetically interacts with UNC-124, and unc-7 mutants are phenotypically similar to unc-9 and unc-124 mutants; UNC-7 genetically interacts with AVR-14 and GLC-1 in the response to ivermectin. | Paper_evidence (11) | ||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables gap junction channel activity. Involved in several processes, including regulation of multicellular organismal process; reproductive behavior; and response to anesthetic. Located in gap junction and neuron projection membrane. Expressed in several structures, including OL socket cell; intestine; muscle cell; neurons; and pharyngeal gland cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R07D5.1a | |||||
R07D5.1b | |||||||
R07D5.1c | |||||||
R07D5.1d | |||||||
R07D5.1e | |||||||
R07D5.1f | |||||||
R07D5.1g | |||||||
R07D5.1h | |||||||
R07D5.1i | |||||||
R07D5.1j | |||||||
Corresponding_transcript (11) | |||||||
Other_sequence (45) | |||||||
Associated_feature (33) | |||||||
Experimental_info | RNAi_result (14) | ||||||
Expr_pattern (20) | |||||||
Drives_construct (12) | |||||||
Construct_product | WBCnstr00013477 | ||||||
WBCnstr00014601 | |||||||
WBCnstr00020987 | |||||||
WBCnstr00020988 | |||||||
WBCnstr00021037 | |||||||
WBCnstr00022281 | |||||||
WBCnstr00022773 | |||||||
WBCnstr00033676 | |||||||
WBCnstr00034176 | |||||||
WBCnstr00042489 | |||||||
Antibody | WBAntibody00000520 | ||||||
WBAntibody00001906 | |||||||
WBAntibody00001921 | |||||||
Microarray_results (40) | |||||||
Expression_cluster (145) | |||||||
Interaction (84) | |||||||
Map_info | Map | X | Position | 22.0336 | Error | 0.049576 | |
Well_ordered | |||||||
Positive | Inside_rearr | mnDf19 | |||||
mnDp26 | |||||||
Positive_clone | C26D6 | ||||||
R07D5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | 2_point (17) | ||||||
Multi_point (26) | |||||||
Pos_neg_data (23) | |||||||
Landmark_gene | |||||||
Reference (115) | |||||||
Remark | Cloned, positive rescue by ZK1098 [Byrd D, Jin Y]. krb 14/11/01 | ||||||
Method | Gene |