WormBase Tree Display for Gene: WBGene00004300

WBGene00004300 Evidence: Person_evidence (2)
  SMap: S_parent: Sequence: F38A3
  Identity: Version: 1
    Name: CGC_name: ram-2 Person_evidence: WBPerson37
      Sequence_name: F38A3.2
      Molecular_name: F38A3.2
        F38A3.2.1
        CE02214
      Other_name: ram-3 Paper_evidence: WBPaper00019612
          CGC_data_submission
        col-82 CGC_data_submission
        CELE_F38A3.2 Accession_evidence: NDB BX284602
      Public_name: ram-2
    DB_info: Database: AceView gene 2L306
        WormQTL gene WBGene00004300
        WormFlux gene WBGene00004300
        NDB locus_tag CELE_F38A3.2
        Panther gene CAEEL|WormBase=WBGene00004300|UniProtKB=Q20136
          family PTHR24637
        NCBI gene 174687
        RefSeq protein NM_063961.5
        TrEMBL UniProtAcc Q20136
        UniProt_GCRP UniProtAcc Q20136
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ram
    Reference_allele: WBVar00000577
    Allele (31)
    Legacy_information: [C.elegansII] bx39ts : adult males have lumpy, amorphous ray morphology; bx39/+ has variably swollen raytips; fails to complement unlinked ram mutations;hermaphrodite WT. ME3. NA1. [Baird and Emmons 1990; PB]
      [C.elegansII] bx32 : adult males have lumpy, amorphous ray morphology; bx32/+ has variably swollen raytips; fails to complement unlinked ram mutations;hermaphrodite WT. ME3. NA1. [Baird and Emmons 1990; PB]
    Strain: WBStrain00007163
      WBStrain00007167
      WBStrain00007171
      WBStrain00007158
    RNASeq_FPKM (74)
    GO_annotation: 00067285
      00067286
      00067287
      00067288
      00067289
      00112633
    Ortholog (31)
    Paralog (164)
    Structured_description: Concise_description: ram-2 encodes a cuticle collagen that interacts with unc-6 to affect ray cell migration, and interacts with unc-5 and unc-6 to affect embryonic viability; also affects ray morphology in males such that the structural cells and the hypodermis of the rays are swollen in mutants. Paper_evidence: WBPaper00018148
            WBPaper00019612
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be a structural constituent of cuticle. Involved in nematode male tail tip morphogenesis and sensory organ development. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F38A3.2
    Corresponding_transcript: F38A3.2.1
    Other_sequence (84)
    Associated_feature: WBsf650536
      WBsf666080
      WBsf666081
      WBsf989577
      WBsf989578
      WBsf1013145
      WBsf223867
  Experimental_info: RNAi_result: WBRNAi00014522 Inferred_automatically: RNAi_primary
      WBRNAi00007391 Inferred_automatically: RNAi_primary
      WBRNAi00031938 Inferred_automatically: RNAi_primary
      WBRNAi00046667 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014012
      Expr1032125
      Expr1150540
      Expr2015248
      Expr2033482
    Drives_construct: WBCnstr00035581
    Construct_product: WBCnstr00035581
    Microarray_results (23)
    Expression_cluster (322)
    Interaction (126)
  Map_info: Map: II Position: 3.14871 Error: 0.001697
    Positive: Positive_clone: F38A3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 4722
        4723
      Multi_point: 1671
  Reference (16)
  Method: Gene