WormBase Tree Display for Gene: WBGene00000189
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| WBGene00000189 | SMap | S_parent | Sequence | ZK632 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name (5) | |||||||||
| DB_info | Database | AceView | gene | 3K913 | |||||
| WormQTL | gene | WBGene00000189 | |||||||
| WormFlux | gene | WBGene00000189 | |||||||
| NDB | locus_tag | CELE_ZK632.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000189|UniProtKB=P34212 | |||||||
| family | PTHR11711 | ||||||||
| NCBI | gene | 176392 | |||||||
| RefSeq | protein | NM_001392182.1 | |||||||
| SwissProt | UniProtAcc | P34212 | |||||||
| TREEFAM | TREEFAM_ID | TF105465 | |||||||
| UniProt_GCRP | UniProtAcc | P34212 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | arl | ||||||||
| Allele (16) | |||||||||
| Legacy_information | [C.elegansII] NMK. pka arf-2. Encodes predicted 184 aa ARL2-like protein. [MQ] | ||||||||
| [C.elegansII] NMK. Encodes predicted ARF-like protein. ZK632.8[MQ] | |||||||||
| ortholog of mammalian ARL5 | |||||||||
| Strain | WBStrain00032550 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Contained_in_operon | CEOP3632 | ||||||||
| Ortholog (49) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Concise_description | arl-5 encodes a paralog of the ADP-ribosylation factor-like protein EVL-20; ARL-5 is an ortholog of mammalian ARL5. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTP binding activity and GTPase activity. Involved in microtubule cytoskeleton organization. Predicted to be located in trans-Golgi network. Is an ortholog of human ARL5A (ADP ribosylation factor like GTPase 5A) and ARL5B (ADP ribosylation factor like GTPase 5B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK632.8 | |||||||
| Corresponding_transcript | ZK632.8.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf225635 | ||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr1015873 | ||||||||
| Expr1030112 | |||||||||
| Expr1162994 | |||||||||
| Expr2009402 | |||||||||
| Expr2027638 | |||||||||
| Drives_construct | WBCnstr00037675 | ||||||||
| Construct_product | WBCnstr00037675 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | III | Position | 1.10794 | Error | 0.006147 | |||
| Positive | Positive_clone | NM#ARFB | |||||||
| ZK632 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00015195 | ||||||||
| WBPaper00027296 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | arl-2 is an other name for arl-5. However, both arl-2 and arl-5 are also 'other names' for evl-20 [030116 ck1]. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
