WormBase Tree Display for Gene: WBGene00010089
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WBGene00010089 | SMap | S_parent | Sequence | F55B12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | hpo-31 | Paper_evidence | WBPaper00038231 | |||
Person_evidence | WBPerson26 | ||||||
Sequence_name | F55B12.4 | ||||||
Molecular_name | F55B12.4 | ||||||
F55B12.4.1 | |||||||
CE26815 | |||||||
F55B12.4.2 | |||||||
Other_name | CELE_F55B12.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | hpo-31 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hpo | ||||||
Allele (31) | |||||||
Strain | WBStrain00049382 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00086636 | ||||||
00086637 | |||||||
00086638 | |||||||
00086639 | |||||||
00086640 | |||||||
00086641 | |||||||
00086642 | |||||||
00086643 | |||||||
00117582 | |||||||
00117583 | |||||||
00117584 | |||||||
Contained_in_operon | CEOP5404 | ||||||
Ortholog (36) | |||||||
Structured_description | Automated_description | Predicted to enable tRNA binding activity. Predicted to be involved in mitochondrial tRNA 3'-end processing and tRNA 3'-terminal CCA addition. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in sideroblastic anemia with B-cell immunodeficiency, periodic fevers, and developmental delay. Is an ortholog of human TRNT1 (tRNA nucleotidyl transferase 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0080209 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17341) | ||
Molecular_info | Corresponding_CDS | F55B12.4 | |||||
Corresponding_CDS_history | F55B12.4:wp42 | ||||||
Corresponding_transcript | F55B12.4.1 | ||||||
F55B12.4.2 | |||||||
Other_sequence (31) | |||||||
Associated_feature | WBsf662056 | ||||||
Experimental_info | RNAi_result (12) | ||||||
Expr_pattern | Expr1013745 | ||||||
Expr1034403 | |||||||
Expr1152241 | |||||||
Expr2012571 | |||||||
Expr2030808 | |||||||
Drives_construct | WBCnstr00031676 | ||||||
Construct_product | WBCnstr00031676 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (75) | |||||||
Interaction (14) | |||||||
Map_info | Map | V | Position | 5.64395 | Error | 0.014982 | |
Positive | Positive_clone | F55B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00061983 | |||||||
WBPaper00063971 | |||||||
WBPaper00064934 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |