WormBase Tree Display for Gene: WBGene00004478
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| WBGene00004478 | SMap | S_parent | Sequence | F40F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rps-9 | |||||||
| Sequence_name | F40F8.10 | ||||||||
| Molecular_name | F40F8.10 | ||||||||
| F40F8.10.1 | |||||||||
| CE05849 | |||||||||
| Other_name | CELE_F40F8.10 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rps-9 | ||||||||
| DB_info | Database | AceView | gene | 2L416 | |||||
| WormQTL | gene | WBGene00004478 | |||||||
| WormFlux | gene | WBGene00004478 | |||||||
| NDB | locus_tag | CELE_F40F8.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004478|UniProtKB=Q20228 | |||||||
| family | PTHR11831 | ||||||||
| NCBI | gene | 174699 | |||||||
| RefSeq | protein | NM_063983.6 | |||||||
| SwissProt | UniProtAcc | Q20228 | |||||||
| TREEFAM | TREEFAM_ID | TF300795 | |||||||
| UniProt_GCRP | UniProtAcc | Q20228 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rps | ||||||||
| Allele (21) | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps9 using blastP | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067533 | ||||||||
| 00067534 | |||||||||
| 00067535 | |||||||||
| 00067536 | |||||||||
| 00067537 | |||||||||
| 00067538 | |||||||||
| 00067539 | |||||||||
| 00067540 | |||||||||
| 00067541 | |||||||||
| 00067542 | |||||||||
| 00067543 | |||||||||
| 00067544 | |||||||||
| 00067545 | |||||||||
| 00067546 | |||||||||
| 00067547 | |||||||||
| 00112976 | |||||||||
| 00112977 | |||||||||
| 00112978 | |||||||||
| 00112979 | |||||||||
| 00112980 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00016740 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description (2) | |||||||||
| Molecular_info | Corresponding_CDS | F40F8.10 | |||||||
| Corresponding_transcript | F40F8.10.1 | ||||||||
| Other_sequence (237) | |||||||||
| Associated_feature | WBsf650546 | ||||||||
| WBsf650547 | |||||||||
| WBsf666117 | |||||||||
| WBsf666118 | |||||||||
| WBsf666119 | |||||||||
| WBsf989631 | |||||||||
| WBsf1013165 | |||||||||
| WBsf223894 | |||||||||
| Experimental_info | RNAi_result (45) | ||||||||
| Expr_pattern | Expr1026473 | ||||||||
| Expr1032281 | |||||||||
| Expr1150739 | |||||||||
| Expr2015533 | |||||||||
| Expr2033768 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction (251) | |||||||||
| Map_info | Map | II | Position | 3.319 | Error | 0.001084 | |||
| Positive | Positive_clone | F40F8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
