WormBase Tree Display for Gene: WBGene00004478
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WBGene00004478 | SMap | S_parent | Sequence | F40F8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rps | ||||||
Allele (21) | |||||||
Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps9 using blastP | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00067533 | ||||||
00067534 | |||||||
00067535 | |||||||
00067536 | |||||||
00067537 | |||||||
00067538 | |||||||
00067539 | |||||||
00067540 | |||||||
00067541 | |||||||
00067542 | |||||||
00067543 | |||||||
00067544 | |||||||
00067545 | |||||||
00067546 | |||||||
00067547 | |||||||
00112976 | |||||||
00112977 | |||||||
00112978 | |||||||
00112979 | |||||||
00112980 | |||||||
Ortholog (39) | |||||||
Paralog | WBGene00016740 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Concise_description | rps-9 encodes a small ribosomal subunit S9 protein. | Curator_confirmed | WBPerson567 | |||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit biogenesis. Predicted to be located in cytoplasm; nucleolus; and ribosome. Predicted to be part of cytosolic small ribosomal subunit and small-subunit processome. Is an ortholog of human RPS9 (ribosomal protein S9). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F40F8.10 | |||||
Corresponding_transcript | F40F8.10.1 | ||||||
Other_sequence (237) | |||||||
Associated_feature | WBsf650546 | ||||||
WBsf650547 | |||||||
WBsf666117 | |||||||
WBsf666118 | |||||||
WBsf666119 | |||||||
WBsf989631 | |||||||
WBsf1013165 | |||||||
WBsf223894 | |||||||
Experimental_info | RNAi_result (45) | ||||||
Expr_pattern | Expr1026473 | ||||||
Expr1032281 | |||||||
Expr1150739 | |||||||
Expr2015533 | |||||||
Expr2033768 | |||||||
Microarray_results (21) | |||||||
Expression_cluster (162) | |||||||
Interaction (251) | |||||||
Map_info | Map | II | Position | 3.319 | Error | 0.001084 | |
Positive | Positive_clone | F40F8 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (12) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |