WormBase Tree Display for Gene: WBGene00011891
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WBGene00011891 | SMap | S_parent | Sequence | T21C9 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | del-6 | Person_evidence | WBPerson260 | |||
WBPerson145 | |||||||
Sequence_name | T21C9.3 | ||||||
Molecular_name | T21C9.3a | ||||||
T21C9.3a.1 | |||||||
CE43799 | |||||||
T21C9.3b | |||||||
CE43784 | |||||||
T21C9.3a.2 | |||||||
T21C9.3a.3 | |||||||
T21C9.3b.1 | |||||||
Other_name | CELE_T21C9.3 | Accession_evidence | NDB | BX284605 | |||
Public_name | del-6 | ||||||
DB_info | Database | AceView | gene | 5L55 | |||
WormQTL | gene | WBGene00011891 | |||||
WormFlux | gene | WBGene00011891 | |||||
NDB | locus_tag | CELE_T21C9.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011891|UniProtKB=Q8MPW0 | |||||
family | PTHR11690 | ||||||
NCBI | gene | 179474 | |||||
RefSeq | protein | NM_001380748.1 | |||||
NM_171534.9 | |||||||
TREEFAM | TREEFAM_ID | TF325327 | |||||
TrEMBL | UniProtAcc | Q8MPW0 | |||||
Q8MPW1 | |||||||
UniProt_GCRP | UniProtAcc | Q8MPW0 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | del | ||||||
Allele (36) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00084437 | ||||||
00084438 | |||||||
00084439 | |||||||
00084440 | |||||||
00084441 | |||||||
00084442 | |||||||
00084443 | |||||||
00084444 | |||||||
00119101 | |||||||
00119102 | |||||||
00119103 | |||||||
Ortholog (29) | |||||||
Paralog (26) | |||||||
Structured_description | Automated_description | Predicted to enable ligand-gated sodium channel activity. Predicted to be involved in sodium ion transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T21C9.3a | |||||
T21C9.3b | |||||||
Corresponding_CDS_history | T21C9.3a:wp203 | ||||||
T21C9.3b:wp203 | |||||||
Corresponding_transcript | T21C9.3a.1 | ||||||
T21C9.3a.2 | |||||||
T21C9.3a.3 | |||||||
T21C9.3b.1 | |||||||
Corresponding_pseudogene_history | T21C9.3:wp82 | ||||||
Other_sequence | Tcol_isotig04180 | ||||||
MJ04933 | |||||||
CR08407 | |||||||
FD515741.1 | |||||||
CRC11672_1 | |||||||
SRC01072_1 | |||||||
SSC00117_1 | |||||||
DA05184 | |||||||
CR09031 | |||||||
Dviv_isotig17130 | |||||||
JI171843.1 | |||||||
SS01443 | |||||||
GR978820.1 | |||||||
CSC00811_1 | |||||||
AE03751 | |||||||
CR03546 | |||||||
SC00421 | |||||||
AYC02506_1 | |||||||
Hbac_isotig01787 | |||||||
CJC02270_1 | |||||||
Tcir_isotig20750 | |||||||
GR367569.1 | |||||||
Oden_isotig17721 | |||||||
Oden_isotig23339 | |||||||
SR02303 | |||||||
CRC11785_1 | |||||||
CR09032 | |||||||
SSC06543_1 | |||||||
Acan_isotig08056 | |||||||
CRC02023_1 | |||||||
DAC02619_1 | |||||||
Dviv_isotig17131 | |||||||
FC816773.1 | |||||||
Associated_feature | WBsf1001142 | ||||||
WBsf232396 | |||||||
WBsf232397 | |||||||
Experimental_info | RNAi_result | WBRNAi00065616 | Inferred_automatically | RNAi_primary | |||
WBRNAi00035752 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061891 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053719 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1018110 | ||||||
Expr1035242 | |||||||
Expr1157269 | |||||||
Expr2010852 | |||||||
Expr2029090 | |||||||
Drives_construct | WBCnstr00030307 | ||||||
Construct_product | WBCnstr00030307 | ||||||
Microarray_results (24) | |||||||
Expression_cluster (180) | |||||||
Interaction | WBInteraction000540406 | ||||||
WBInteraction000583296 | |||||||
Map_info | Map | V | Position | 2.60085 | |||
Positive | Positive_clone | T21C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00064563 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |