WormBase Tree Display for Gene: WBGene00015487

WBGene00015487 SMap: S_parent: Sequence: C05D11
  Identity: Version: 2
    Name: CGC_name: mrps-17 Person_evidence: WBPerson261
            WBPerson555
      Sequence_name: C05D11.10
      Molecular_name: C05D11.10
        C05D11.10.1
        CE01129
      Other_name: CELE_C05D11.10 Accession_evidence: NDB BX284603
      Public_name: mrps-17
    DB_info: Database: AceView gene 3H520
        WormQTL gene WBGene00015487
        WormFlux gene WBGene00015487
        NDB locus_tag CELE_C05D11.10
        Panther gene CAEEL|WormBase=WBGene00015487|UniProtKB=Q11189
          family PTHR24088
        NCBI gene 175912
        RefSeq protein NM_066008.6
        SwissProt UniProtAcc Q11189
        TREEFAM TREEFAM_ID TF326484
        UniProt_GCRP UniProtAcc Q11189
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrps-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrps
    Allele (12)
    Strain: WBStrain00001398
    RNASeq_FPKM (74)
    GO_annotation: 00057481
      00057482
      00057483
      00057484
      00057485
      00057486
      00057487
      00057488
      00057489
      00121388
      00121389
    Contained_in_operon: CEOP3372
    Ortholog: WBGene00038844 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00055482 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151144 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123006 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222247 Brugia malayi From_analysis: WormBase-Compara
      CSP21.g10505 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8084 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g135 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8236 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g13391 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g18090 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6741 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g17268 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3632 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00179.g6320 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mrps-17 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00051.g2629 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16451 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010713 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06546 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11294 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30172300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7937 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244985 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261855 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00296017 Trichuris muris From_analysis: WormBase-Compara
      WBGene00299970 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0034986 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-050522-390 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14047 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1913508 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1307650 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Structured_description: Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Is an ortholog of human MRPS17 (mitochondrial ribosomal protein S17). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05D11.10
    Corresponding_transcript: C05D11.10.1
    Other_sequence (23)
    Associated_feature: WBsf651127
      WBsf666993
      WBsf666994
      WBsf226822
  Experimental_info: RNAi_result (14)
    Expr_pattern: Chronogram1574
      Expr5166
      Expr1016115
      Expr1036625
      Expr1143822
      Expr2013739
      Expr2031974
    Drives_construct: WBCnstr00002288
      WBCnstr00028808
    Construct_product: WBCnstr00028808
    Microarray_results (18)
    Expression_cluster (115)
    Interaction (42)
  Map_info: Map: III Position: -1.28077 Error: 0.000501
    Positive: Positive_clone: C05D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033751
    WBPaper00038491
    WBPaper00047123
    WBPaper00049828
    WBPaper00055090
    WBPaper00061547
    WBPaper00063976
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene