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WormBase Tree Display for Gene: WBGene00009226

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Name Class

WBGene00009226SMapS_parentSequenceF28G4
IdentityVersion2
NameCGC_namecyp-37B1
Sequence_nameF28G4.1
Molecular_nameF28G4.1
F28G4.1.1
CE15919
Other_nameCELE_F28G4.1Accession_evidenceNDBBX284605
Public_namecyp-37B1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
221 Sep 2004 09:38:16WBPerson1971Name_changeCGC_namecyp-37B1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcyp
Allele (139)
RNASeq_FPKM (74)
GO_annotation00030836
00030837
00030838
00030839
00030840
00030841
00030842
00116981
00116982
00116983
00116984
OrthologWBGene00063763Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00035992Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
WormBase-Compara
WBGene00142367Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00157090Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00125205Caenorhabditis japonicaFrom_analysisOMA
WBGene00093701Pristionchus pacificusFrom_analysisOMA
WBGene00100817Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
CBOVI.g7162Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12756Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g12757Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2265Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4844Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18387Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g7846Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8438Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8440Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3675Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18394Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-cyp-37B1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19362Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01215.g19319Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02959Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019714Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01052Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02211Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22859Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50382800Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50383000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50383100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g17106Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00218555Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00259852Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264780Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00266267Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286519Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0015032Drosophila melanogasterFrom_analysisOMA
Panther
PhylomeDB
ZFIN:ZDB-GENE-061103-601Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
ZFIN:ZDB-GENE-061103-88Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
HGNC:23198Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
MGI:2142763Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
RGD:708530Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
Panther
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Involved in defense response to Gram-positive bacterium. Predicted to be located in membrane. Expressed in intestinal cell. Human ortholog(s) of this gene implicated in Bietti crystalline corneoretinal dystrophy. Is an ortholog of human CYP4V2 (cytochrome P450 family 4 subfamily V member 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050664Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:23198)
Molecular_infoCorresponding_CDSF28G4.1
Corresponding_transcriptF28G4.1.1
Other_sequence (14)
Associated_featureWBsf647627
WBsf233092
Experimental_infoRNAi_result (5)
Expr_patternExpr9961
Expr1010379
Expr1034027
Expr1149765
Expr2010744
Expr2028980
Drives_constructWBCnstr00014974
WBCnstr00032359
Construct_productWBCnstr00032359
Microarray_results (19)
Expression_cluster (337)
Interaction (50)
Map_infoMapVPosition9.93079Error0.002396
PositivePositive_cloneF28G4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00029387
WBPaper00031529
WBPaper00038491
WBPaper00040808
WBPaper00042257
WBPaper00050916
WBPaper00051014
WBPaper00055090
WBPaper00061938
WBPaper00065988
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene