WormBase Tree Display for Gene: WBGene00021106

WBGene00021106 SMap: S_parent: Sequence: W09B7
  Identity: Version: 1
    Name: Sequence_name: W09B7.1
      Molecular_name: W09B7.1
        W09B7.1.1
        CE52165
      Other_name: W09B7.c Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_W09B7.1 Accession_evidence: NDB BX284605
      Public_name: W09B7.1
    DB_info: Database: AceView gene 5J307
        WormFlux gene WBGene00021106
        NDB locus_tag CELE_W09B7.1
        NCBI gene 189306
        RefSeq protein NM_001359790.1
        TREEFAM TREEFAM_ID TF322078
        TrEMBL UniProtAcc G5EBQ1
        UniProt_GCRP UniProtAcc G5EBQ1
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (22)
    RNASeq_FPKM (74)
    Ortholog: chrV_pilon.g15093 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00008010 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00008862 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00013832 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00017185 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00018310 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00012798 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013954 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Expressed in intestinal cell. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W09B7.1
    Corresponding_CDS_history: W09B7.1:wp262
    Corresponding_transcript: W09B7.1.1
    Associated_feature: WBsf1000764
      WBsf1020100
  Experimental_info: RNAi_result: WBRNAi00043857 Inferred_automatically: RNAi_primary
      WBRNAi00043858 Inferred_automatically: RNAi_primary
      WBRNAi00082498 Inferred_automatically: RNAi_primary
      WBRNAi00019741 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12640
      Expr12641
      Expr1158549
    Drives_construct (2)
    Construct_product: WBCnstr00022347
      WBCnstr00024686
    Microarray_results (14)
    Expression_cluster: WBPaper00032528:L3_depleted
      WBPaper00036231:long-telomeres_upregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00045303:ZK1236.1(tm4178)_upregulated
      WBPaper00045521:Spermatogenic
      WBPaper00049098:hrde-1(tm1200)-induced_15C
      WBPaper00049098:hrde-1(tm1200)-induced_23C
      WBPaper00049098:hrde-1(tm1200)-induced_p15C
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00052885:hrde-1(tm1200)-emb-4(qm31)_regulated
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00055354:Allantoin_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060764:swsn-1(os22ts)_upregulated
      WBPaper00062056:lin-15B(n744)_upregulated
      WBPaper00062156:jmjd-5(zr1234)_downregulated_germline
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065005:sams-4(RNAi)_upregulated
      WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
      WBPaper00066110:Doxorubicin_downregulated_tetraploid
      WBPaper00066163:crtc-1(wbm18)_downregulated_set-2(ok952)
      WBPaper00066163:set-2(ok952)_upregulated_N2
      cgc4489_group_2
      WBPaper00031477:Up_deps-1_vs_WT
      WBPaper00036383:ash-2_Day8_regulated
      WBPaper00036429:glp-1(oz112)_upregulated
      WBPaper00041002:HQ_3d_2.0mM_Down
      WBPaper00042128:gei-8(ok1671)_upregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      [cgc6390]:mixed_oogenesis-somatic
    SAGE_tag: SAGE:agcaccacgtggacaac Strand: Sense
      SAGE:cattatttgc Strand: Antisense
      SAGE:agcaccacgt Strand: Sense
  Map_info: Positive: Positive_clone: W09B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 1.63218
  Method: Gene