WormBase Tree Display for Gene: WBGene00019067

WBGene00019067 SMap: S_parent: Sequence: F58H7
  Identity: Version: 1
    Name: Sequence_name: F58H7.1
      Molecular_name: F58H7.1
        F58H7.1.1
        CE52103
      Other_name: CELE_F58H7.1 Accession_evidence: NDB BX284604
      Public_name: F58H7.1
    DB_info: Database: AceView gene 4B684
        WormQTL gene WBGene00019067
        WormFlux gene WBGene00019067
        NDB locus_tag CELE_F58H7.1
        NCBI gene 186550
        RefSeq protein NM_001356905.3
        TrEMBL UniProtAcc O45090
        UniProt_GCRP UniProtAcc O45090
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (92)
    RNASeq_FPKM (74)
    Ortholog (25)
    Structured_description: Automated_description: Enriched in neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on RNA-seq and microarray studies. Is affected by four chemicals including Tunicamycin; multi-walled carbon nanotube; and Testosterone based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58H7.1
    Corresponding_CDS_history: F58H7.1:wp261
    Corresponding_transcript: F58H7.1.1
    Other_sequence: MH06180
    Associated_feature: WBsf651633
      WBsf667735
      WBsf995302
  Experimental_info: RNAi_result: WBRNAi00033142 Inferred_automatically: RNAi_primary
      WBRNAi00049075 Inferred_automatically: RNAi_primary
      WBRNAi00016029 Inferred_automatically: RNAi_primary
      WBRNAi00033144 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011662
      Expr1038234
      Expr1152816
      Expr2004429
      Expr2022652
    Microarray_results (19)
    Expression_cluster: WBPaper00037946:LIN-39_interacting
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00042561:smgl-1(RNAi)_upregulated
      WBPaper00042561:smgl-2(RNAi)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00046024:sleep_upregulated_oscillating
      WBPaper00048988:neuron_enriched
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_downregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053295:lin-22(icb38)_upregulated
      WBPaper00053295:lin-22(ot267)_upregulated
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055648:male-CEM-neurons_expressed
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059421:daf-3(mgDf90)_downregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:ADE
      WBPaper00061340:CEP
      WBPaper00061340:IL1
      WBPaper00061340:OLL
      WBPaper00061340:OLQ
      WBPaper00061340:RMD
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061527:ckr-1-T09B9.3
      WBPaper00061651:ADE_enriched
      WBPaper00061651:CEP_enriched
      WBPaper00061651:IL1_enriched
      WBPaper00061651:OLQ_enriched
      WBPaper00061651:PDE_enriched
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00064637:cox-5B(RNAi)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065749:endu-2(tm4977)_upregulated
      WBPaper00065841:36_0
      WBPaper00065841:36_2
      WBPaper00065841:36_3
      WBPaper00065841:44_0
      WBPaper00065841:44_1
      WBPaper00065841:72_0
      WBPaper00065841:100_0
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_14
      WBPaper00005124:testosterone_10-9M_regulated
      WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00036123:Atrazine_regulated
      WBPaper00040876:mir-35_downregulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00047070:N2_UV_downregulated
      WBPaper00047070:xpa-1_UV_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
    Interaction: WBInteraction000450608
  Map_info: Positive: Positive_clone: F58H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV -23.0172
  Method: Gene