WormBase Tree Display for Gene: WBGene00018802

WBGene00018802 SMap: S_parent: Sequence: F54D8
  Identity: Version: 1
    Name: Sequence_name: F54D8.6
      Molecular_name: F54D8.6
        F54D8.6.1
        CE47843
      Other_name: CELE_F54D8.6 Accession_evidence: NDB BX284603
      Public_name: F54D8.6
    DB_info: Database: AceView gene 3G195
        WormQTL gene WBGene00018802
        WormFlux gene WBGene00018802
        NDB locus_tag CELE_F54D8.6
        NCBI gene 175695
        RefSeq protein NM_001027434.6
        TrEMBL UniProtAcc Q8MQ25
        UniProt_GCRP UniProtAcc Q8MQ25
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (64)
    Strain: WBStrain00002157
    RNASeq_FPKM (74)
    Ortholog (15)
    Structured_description: Automated_description: Expressed in head. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D8.6
    Corresponding_CDS_history: F54D8.6:wp234
      F54D8.6a:wp137
      F54D8.6b:wp137
    Corresponding_transcript: F54D8.6.1
    Other_sequence: CBC09504_1
      CBC12817_1
      CBC00011_1
      CGC00940_1
    Associated_feature: WBsf645148
      WBsf658517
      WBsf658886
      WBsf658887
      WBsf658888
      WBsf992295
      WBsf992296
      WBsf1014838
  Experimental_info: RNAi_result: WBRNAi00066120 Inferred_automatically: RNAi_primary
      WBRNAi00005032 Inferred_automatically: RNAi_primary
      WBRNAi00015628 Inferred_automatically: RNAi_primary
      WBRNAi00084975 Inferred_automatically: RNAi_primary
      WBRNAi00067978 Inferred_automatically: RNAi_primary
      WBRNAi00048330 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram382
      Expr6179
      Expr1025705
      Expr1038108
      Expr1152128
      Expr2004159
      Expr2022383
    Drives_construct: WBCnstr00002917
    Microarray_results (20)
    Expression_cluster: WBPaper00027057:DCR-1_interacting_embryo
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_embryo_enriched
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055226:ADR-2_target_N2
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00059664:srbc-48(ac23)_downregulated
      WBPaper00060100:SiNP_upregulated_mRNA
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:F41H10.4-C56C10.10_1410
      WBPaper00061527:tub-2_4713-daf-2_5288
      WBPaper00062193:hsf-1(RNAi)_downregulated
      WBPaper00062193:skn-1(RNAi)_downregulated
      WBPaper00064716:paraquat_upregulated
      WBPaper00064735:bet-1B(OE)_vs_N2_upregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065373:Cisplatin_upregulated_WT
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      cgc4386_cluster_6_5
      cgc4489_group_6
      WBPaper00005124:progesterone_10-7M_regulated
      WBPaper00025032:cluster_135
      WBPaper00025099:MA_specific
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00030985:Erwinia_carotovora_downregulated
      WBPaper00040823:alg-1(gk214)_downregulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00048989:N2_allantoin_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:intrinsic
    Interaction: WBInteraction000007432
      WBInteraction000029495
      WBInteraction000304724
      WBInteraction000424064
      WBInteraction000513405
      WBInteraction000513421
      WBInteraction000543394
      WBInteraction000543912
      WBInteraction000549052
  Map_info: Positive: Positive_clone: F54D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.13838
  Reference: WBPaper00028984
    WBPaper00055090
  Method: Gene