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WormBase Tree Display for Gene: WBGene00018527

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Name Class

WBGene00018527SMapS_parentSequenceF47B3
IdentityVersion1
NameSequence_nameF47B3.3
Molecular_nameF47B3.3
F47B3.3.1
CE53690
Other_nameCELE_F47B3.3Accession_evidenceNDBBX284601
Public_nameF47B3.3
DB_infoDatabaseAceViewgene1E531
WormQTLgeneWBGene00018527
WormFluxgeneWBGene00018527
NDBlocus_tagCELE_F47B3.3
PanthergeneCAEEL|WormBase=WBGene00018527|UniProtKB=P83387
familyPTHR22776
NCBIgene185886
RefSeqproteinNM_001375254.1
TREEFAMTREEFAM_IDTF320945
TrEMBLUniProtAccP83387
UniProt_GCRPUniProtAccP83387
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:00WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar01499786
WBVar01499985
WBVar01498959
RNASeq_FPKM (74)
GO_annotation00048829
00048830
00048831
00048832
00048833
00123644
Ortholog (41)
ParalogWBGene00008401Caenorhabditis elegansFrom_analysisPanther
WBGene00009741Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010567Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010727Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00016599Caenorhabditis elegansFrom_analysisPanther
WBGene00017909Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019780Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Human ortholog(s) of this gene implicated in schizophrenia. Is an ortholog of human PLLP (plasmolipin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:5419Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:18553)
Molecular_infoCorresponding_CDSF47B3.3
Corresponding_CDS_historyF47B3.3:wp273
Corresponding_transcriptF47B3.3.1
Other_sequenceMI03802
DAC01273_1
Associated_featureWBsf217460
Experimental_infoRNAi_resultWBRNAi00003691Inferred_automaticallyRNAi_primary
WBRNAi00003522Inferred_automaticallyRNAi_primary
WBRNAi00091338Inferred_automaticallyRNAi_primary
WBRNAi00045869Inferred_automaticallyRNAi_primary
Expr_patternExpr1151441
Expr2003831
Expr2022051
Drives_constructWBCnstr00026445
Construct_productWBCnstr00026445
Microarray_results (22)
Expression_clusterWBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045316:prg-1_upregulated_L2
WBPaper00045521:Gender_Neutral
WBPaper00048971:daf-16(mgDf50)_downregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055897:heat-shock_upregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056826:hmc_biased
WBPaper00061527:lon-8-C18D11.1_11630
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064509:static-magnetic-field_upregulated
WBPaper00065032:PAO1_vs_Delt.Pf4-infection_downregulated
WBPaper00066110:Cisplatin_downregulated_tetraploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_6
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031003:0hr_muscle_enriched
WBPaper00031003:24hr_muscle_enriched
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036286:Pattern_C
WBPaper00037695:LD_3-day
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040876:mir-35_downregulated
WBPaper00040985:AIN-2_asynchronous_muscle
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00055899:nitroguanidine_regulated
[cgc6390]:Cluster_C
InteractionWBInteraction000187199
WBInteraction000336194
WBInteraction000411622
WBInteraction000441718
WBInteraction000447474
Map_infoPositivePositive_cloneF47B3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-1.90081
Reference (2)
MethodGene