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WormBase Tree Display for Gene: WBGene00017028

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Name Class

WBGene00017028SMapS_parentSequenceD1044
IdentityVersion2
NameCGC_namedex-1Paper_evidenceWBPaper00033050
Person_evidenceWBPerson576
Sequence_nameD1044.2
Molecular_nameD1044.2a
D1044.2a.1
CE44889
D1044.2b
CE44959
D1044.2c
CE45008
D1044.2b.1
D1044.2c.1
Other_nameCELE_D1044.2Accession_evidenceNDBBX284603
Public_namedex-1
DB_infoDatabaseAceViewgene3G623
WormQTLgeneWBGene00017028
WormFluxgeneWBGene00017028
NDBlocus_tagCELE_D1044.2
PanthergeneCAEEL|WormBase=WBGene00017028|UniProtKB=P41950
familyPTHR24039
NCBIgene175761
RefSeqproteinNM_065780.6
NM_065781.6
NM_001392098.1
SwissProtUniProtAccP41950
TREEFAMTREEFAM_IDTF335195
UniProt_GCRPUniProtAccP41950
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
230 Aug 2012 13:01:18WBPerson2970EventAcquires_mergeWBGene00044269
Name_changeCGC_namedex-1
Acquires_mergeWBGene00044269
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdex
Allele (123)
RNASeq_FPKM (74)
GO_annotation (14)
Ortholog (29)
Structured_description (2)
Molecular_infoCorresponding_CDSD1044.2a
D1044.2b
D1044.2c
Corresponding_CDS_historyD1044.2a:wp154
D1044.2b:wp214
Corresponding_transcriptD1044.2a.1
D1044.2b.1
D1044.2c.1
Other_sequenceBUC00544_1
JI164513.1
Associated_feature (15)
Experimental_infoRNAi_resultWBRNAi00093012Inferred_automaticallyRNAi_primary
WBRNAi00030334Inferred_automaticallyRNAi_primary
WBRNAi00066041Inferred_automaticallyRNAi_primary
WBRNAi00005972Inferred_automaticallyRNAi_primary
WBRNAi00012515Inferred_automaticallyRNAi_primary
WBRNAi00043370Inferred_automaticallyRNAi_primary
Expr_patternExpr3888
Expr13993
Expr13994
Expr14573
Expr14574
Expr1025013
Expr1037319
Expr1147354
Expr2010861
Expr2029099
Drives_constructWBCnstr00011720
WBCnstr00027625
WBCnstr00040516
WBCnstr00040517
WBCnstr00041170
Construct_productWBCnstr00027625
WBCnstr00040517
Microarray_results (37)
Expression_clusterWBPaper00031040:Cluster_6
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035197:fer-1_downregulated
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:hypodermis_embryo_enriched
WBPaper00037950:hypodermis_embryo_SelectivelyEnriched
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00042561:smg-2(RNAi)_downregulated
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046121:ecdoderm_unique
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_downregulated
WBPaper00046337:polysomal_N2_vs_daf-2_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00048690:hermaphrodite-Z1-Z4-daughter_enriched
WBPaper00048988:neuron_expressed
WBPaper00049018:ham-3(RNAi)_downregulated
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_4
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00050094:mes-2(bn11)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050163:let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:seam_expressed
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056039:ptl-1(ok621)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056167:Cry5B_upregulated
WBPaper00056284:ints-1(RNAi)_downregulated
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059440:LAG-1_interacting_germline
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Ciliated_non_amphid_neuron
WBPaper00061340:Excretory_gland
WBPaper00061340:g1A_g1P
WBPaper00061340:g1A_parent
WBPaper00061340:g2
WBPaper00061340:g2_parent
WBPaper00061340:hyp1V_and_ant_arc_V
WBPaper00061340:Neuroblast_IL1_IL2
WBPaper00061340:OLQ_grandparent
WBPaper00061340:Parents_of_U_F_B_DVA
WBPaper00061340:Parent_of_AMsh_URB
WBPaper00061340:Parent_of_exc_duct_pore_DB_1_3
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:Parent_of_hyp3_ILsoDx
WBPaper00061340:Parent_of_K_Kprime
WBPaper00061340:Parent_of_PVP_and_rect_V
WBPaper00061340:Seam_cell
WBPaper00061341:28C_48h_upregulated
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061466:nath-10(icb102)_downregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061527:F58E6.13_17427-ifa-3
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064769:him-17(me24)_downregulated
WBPaper00064871:hypoxia_downregulated_F2
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:24_1
WBPaper00065841:30_1
WBPaper00065841:30_2
WBPaper00065841:82_1
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4386_cluster_6_4
cgc4489_group_9
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025032:cluster_50
WBPaper00025141:N2_Expressed_Genes
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Erwinia_carotovora_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00032948:FedUp
WBPaper00034661:AgNPs_downregulated
WBPaper00034739:N2lessDR1350
WBPaper00034739:RIL17lessRIL14
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00047070:N2_starvation_downregulated
InteractionWBInteraction000277489
WBInteraction000343266
Map_infoMapIIIPosition-1.56394
PositivePositive_cloneD1044Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (16)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene