Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00012345

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00012345SMapS_parentSequenceW08E3
IdentityVersion1
NameSequence_nameW08E3.4
Molecular_nameW08E3.4a
W08E3.4a.1
CE41273
W08E3.4b
CE54287
W08E3.4b.1
Other_nameCELE_W08E3.4Accession_evidenceNDBBX284601
Public_nameW08E3.4
DB_infoDatabaseAceViewgene1N928
WormQTLgeneWBGene00012345
WormFluxgeneWBGene00012345
NDBlocus_tagCELE_W08E3.4
PanthergeneCAEEL|WormBase=WBGene00012345|UniProtKB=P91915
familyPTHR10809
NCBIgene189290
RefSeqproteinNM_001392964.1
NM_060946.6
TrEMBLUniProtAccA0A7R9SUH3
P91915
UniProt_GCRPUniProtAccP91915
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (36)
RNASeq_FPKM (74)
Ortholog (23)
Paralog (6)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalpppapa; ABaraappaa; ABplapppaa; neuronal sheath cell; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: PapD-like superfamily and Immunoglobulin-like fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW08E3.4a
W08E3.4b
Corresponding_CDS_historyW08E3.4:wp90
W08E3.4:wp177
Corresponding_transcriptW08E3.4a.1
W08E3.4b.1
Other_sequenceCJC02406_1
Associated_featureWBsf649697
WBsf665061
WBsf985830
WBsf985831
WBsf1011051
Experimental_infoRNAi_resultWBRNAi00036386Inferred_automaticallyRNAi_primary
WBRNAi00054994Inferred_automaticallyRNAi_primary
WBRNAi00004446Inferred_automaticallyRNAi_primary
Expr_patternExpr1020380
Expr1158526
Expr2006861
Expr2025086
Drives_constructWBCnstr00029985
Construct_productWBCnstr00029985
Microarray_results (19)
Expression_clusterWBPaper00031070:rrf-3_eri-1_upregulated
WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00032528:L3_depleted
WBPaper00037950:A-class-motor-neurons_embryo_enriched
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00038168:lin-35_upregulated
WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044616:alg-3-4_upregulated_gene
WBPaper00044736:rising_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045521:Spermatogenic
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00048611:MnCl2_downregulated
WBPaper00049489:AMsh-glia_enriched
WBPaper00049498:npr-1(ur89)_regulated_1
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050231:male_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053289:DREAM-target
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053599:female_vs_male_downregulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_upregulated_L4
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056619:CEPsh_enriched
WBPaper00057265:metaformin_downregulated_OP50
WBPaper00057288:Cold_upregulated_transcript
WBPaper00058598:mex-3(eu149)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059839:S.maltophilia_regulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060526:plp-1(ok2155)_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060886:spr-5(by101)_upregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061340:I5
WBPaper00061340:Neuroblast_AFD_RMD
WBPaper00061340:Parent_of_MI_pm1DR
WBPaper00061340:PVQ_parent
WBPaper00061357:mett-10(ok2204)_downregulated_OP50
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:C01G10.14-dct-9_3227
WBPaper00061902:camt-1(ok515)_regulated_AFD
WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
WBPaper00062056:dpl-1(n2994)_upregulated
WBPaper00062056:lin-35(n745)_upregulated
WBPaper00062056:lin-36(we31)_upregulated
WBPaper00062056:lin-36(we36)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064107:lin-52(3A)_vs_lin-52(WT)_upregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065258:anchor-cell_enriched
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4386_cluster_6_5
cgc4489_group_11
WBPaper00027111:rde-3(r459)_downregulated
WBPaper00027111:rrf-2(ok210)_downregulated
WBPaper00036286:Pattern_H
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00038427:lin-54_germline_changed
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040963:Q200_up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc6390]:intrinsic
InteractionWBInteraction000445951
WBInteraction000503274
Map_infoPositivePositive_cloneW08E3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI18.272
MethodGene