WormBase Tree Display for Gene: WBGene00011641

WBGene00011641 SMap: S_parent: Sequence: T09A5
  Identity: Version: 1
    Name: Sequence_name: T09A5.15
      Molecular_name: T09A5.15
        T09A5.15.1
        CE35004
      Other_name: CELE_T09A5.15 Accession_evidence: NDB BX284602
      Public_name: T09A5.15
    DB_info: Database: AceView gene 2I149
        WormQTL gene WBGene00011641
        WormFlux gene WBGene00011641
        NDB locus_tag CELE_T09A5.15
        NCBI gene 3565530
        RefSeq protein NM_001027160.4
        TrEMBL UniProtAcc Q7YTK7
        UniProt_GCRP UniProtAcc Q7YTK7
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499702
      WBVar01498435
      WBVar00746649
      WBVar02145162
      WBVar01498940
    RNASeq_FPKM (74)
    GO_annotation: 00082534
    Contained_in_operon: CEOP2702
    Ortholog (20)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09A5.15
    Corresponding_transcript: T09A5.15.1
    Other_sequence: Oden_isotig25601
      Tcol_isotig24928
      HBC10732_1
      EX007597.1
      Acan_isotig16536
      Tcir_isotig05945
    Associated_feature: WBsf644423
      WBsf657894
  Experimental_info: Expr_pattern: Expr1020434
      Expr1035128
      Expr1156521
      Expr2006024
      Expr2024239
    Drives_construct: WBCnstr00030508
    Construct_product: WBCnstr00030508
    Microarray_results (12)
    Expression_cluster: WBPaper00035073:mitochondria_protein
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045050:csr-1(hypomorph)_upregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_6
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051558:aging_regulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_fed-L1_Truseq
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00055482:pmt-2(RNAi)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_downregulated_N2
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056997:nmad-1(ok3133)_downregulated_germline_25C
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061340:Pharyngeal_marginal_cell
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064130:Beta-Amyloid_downregulated_protein
      WBPaper00064716:paraquat_upregulated
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00066038:mip-1(how5)_downregulated
      WBPaper00066085:sin-3(syb2172)_downregulated
      WBPaper00041606:CE_X.nematophila_regulated
  Map_info: Positive: Positive_clone: T09A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.586413
  Reference: WBPaper00029257
  Method: Gene